Gene : Solyc12g005100.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG3682 - Predicted membrane protein (associated with esophageal cancer in humans) Description:  UPF0505 protein C16orf62 homolog (AHRD V1 **-- CP062_MOUSE)
Genomic Order:  11 Name:  ? Solyc12g005100.1
Secondary Identifier:  ? PAC:36146972
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g005100.1 0.5kb upstream 0.5kb upstream 21586 true SL2.50ch12: 52337-73922 Solanum lycopersicum
Solyc12g005100.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 73423-73922 Solanum lycopersicum
Solyc12g005100.1 0.5kb downstream 0.5kb downstream 21586 true SL2.50ch12: 51837-73422 Solanum lycopersicum
Solyc12g005100.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 51837-52336 Solanum lycopersicum
Solyc12g005100.1 1.0kb upstream 1.0kb upstream 22086 true SL2.50ch12: 52337-74422 Solanum lycopersicum
Solyc12g005100.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 73423-74422 Solanum lycopersicum
Solyc12g005100.1 1.0kb downstream 1.0kb downstream 22086 true SL2.50ch12: 51337-73422 Solanum lycopersicum
Solyc12g005100.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 51337-52336 Solanum lycopersicum
Solyc12g005100.1 2.0kb upstream 2.0kb upstream 23086 true SL2.50ch12: 52337-75422 Solanum lycopersicum
Solyc12g005100.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 73423-75422 Solanum lycopersicum
Solyc12g005100.1 2.0kb downstream 2.0kb downstream 23086 true SL2.50ch12: 50337-73422 Solanum lycopersicum
Solyc12g005100.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 50337-52336 Solanum lycopersicum
Solyc12g005100.1 5.0kb upstream 5.0kb upstream 26086 true SL2.50ch12: 52337-78422 Solanum lycopersicum
Solyc12g005100.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 73423-78422 Solanum lycopersicum
Solyc12g005100.1 5.0kb downstream 5.0kb downstream 26086 true SL2.50ch12: 47337-73422 Solanum lycopersicum
Solyc12g005100.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 47337-52336 Solanum lycopersicum
Solyc12g005100.1 10.0kb upstream 10.0kb upstream 31086 true SL2.50ch12: 52337-83422 Solanum lycopersicum
Solyc12g005100.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 73423-83422 Solanum lycopersicum
Solyc12g005100.1 10.0kb downstream 10.0kb downstream 31086 true SL2.50ch12: 42337-73422 Solanum lycopersicum
Solyc12g005100.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 42337-52336 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791819 5273 Angiosperm View MSA
121473223 5263 Asterids View MSA
123741968 5271 Pentapetalae View MSA
122794162 5272 Eudicot View MSA
121348229 5274 Embryophyte View MSA
123380782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain