Gene : Solyc12g006090.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR22811:SF50 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2 Description:  Transmembrane emp24 domain-containing protein 3 (AHRD V1 ***- B6TE63_MAIZE); contains Interpro domain(s) IPR000348 emp24/gp25L/p24
Genomic Order:  109 Name:  ? Solyc12g006090.1
Secondary Identifier:  ? PAC:36147443
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g006090.1 0.5kb upstream 0.5kb upstream 2414 true SL2.50ch12: 660798-663211 Solanum lycopersicum
Solyc12g006090.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 662712-663211 Solanum lycopersicum
Solyc12g006090.1 0.5kb downstream 0.5kb downstream 2414 true SL2.50ch12: 660298-662711 Solanum lycopersicum
Solyc12g006090.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 660298-660797 Solanum lycopersicum
Solyc12g006090.1 1.0kb upstream 1.0kb upstream 2914 true SL2.50ch12: 660798-663711 Solanum lycopersicum
Solyc12g006090.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 662712-663711 Solanum lycopersicum
Solyc12g006090.1 1.0kb downstream 1.0kb downstream 2914 true SL2.50ch12: 659798-662711 Solanum lycopersicum
Solyc12g006090.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 659798-660797 Solanum lycopersicum
Solyc12g006090.1 2.0kb upstream 2.0kb upstream 3914 true SL2.50ch12: 660798-664711 Solanum lycopersicum
Solyc12g006090.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 662712-664711 Solanum lycopersicum
Solyc12g006090.1 2.0kb downstream 2.0kb downstream 3914 true SL2.50ch12: 658798-662711 Solanum lycopersicum
Solyc12g006090.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 658798-660797 Solanum lycopersicum
Solyc12g006090.1 5.0kb upstream 5.0kb upstream 6914 true SL2.50ch12: 660798-667711 Solanum lycopersicum
Solyc12g006090.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 662712-667711 Solanum lycopersicum
Solyc12g006090.1 5.0kb downstream 5.0kb downstream 6914 true SL2.50ch12: 655798-662711 Solanum lycopersicum
Solyc12g006090.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 655798-660797 Solanum lycopersicum
Solyc12g006090.1 10.0kb upstream 10.0kb upstream 11914 true SL2.50ch12: 660798-672711 Solanum lycopersicum
Solyc12g006090.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 662712-672711 Solanum lycopersicum
Solyc12g006090.1 10.0kb downstream 10.0kb downstream 11914 true SL2.50ch12: 650798-662711 Solanum lycopersicum
Solyc12g006090.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 650798-660797 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471569 5263 Asterids View MSA
123751948 5271 Pentapetalae View MSA
122788237 5272 Eudicot View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain