Gene : Solyc12g006030.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG3420 - Predicted RNA methylase Description:  Methyltransferase like 5 (AHRD V1 ***- Q5XJ53_DANRE); contains Interpro domain(s) IPR007848 Methyltransferase small
Genomic Order:  104 Name:  ? Solyc12g006030.1
Secondary Identifier:  ? PAC:36149052
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g006030.1 0.5kb upstream 0.5kb upstream 2724 true SL2.50ch12: 627271-629994 Solanum lycopersicum
Solyc12g006030.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 629495-629994 Solanum lycopersicum
Solyc12g006030.1 0.5kb downstream 0.5kb downstream 2724 true SL2.50ch12: 626771-629494 Solanum lycopersicum
Solyc12g006030.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 626771-627270 Solanum lycopersicum
Solyc12g006030.1 1.0kb upstream 1.0kb upstream 3224 true SL2.50ch12: 627271-630494 Solanum lycopersicum
Solyc12g006030.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 629495-630494 Solanum lycopersicum
Solyc12g006030.1 1.0kb downstream 1.0kb downstream 3224 true SL2.50ch12: 626271-629494 Solanum lycopersicum
Solyc12g006030.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 626271-627270 Solanum lycopersicum
Solyc12g006030.1 2.0kb upstream 2.0kb upstream 4224 true SL2.50ch12: 627271-631494 Solanum lycopersicum
Solyc12g006030.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 629495-631494 Solanum lycopersicum
Solyc12g006030.1 2.0kb downstream 2.0kb downstream 4224 true SL2.50ch12: 625271-629494 Solanum lycopersicum
Solyc12g006030.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 625271-627270 Solanum lycopersicum
Solyc12g006030.1 5.0kb upstream 5.0kb upstream 7224 true SL2.50ch12: 627271-634494 Solanum lycopersicum
Solyc12g006030.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 629495-634494 Solanum lycopersicum
Solyc12g006030.1 5.0kb downstream 5.0kb downstream 7224 true SL2.50ch12: 622271-629494 Solanum lycopersicum
Solyc12g006030.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 622271-627270 Solanum lycopersicum
Solyc12g006030.1 10.0kb upstream 10.0kb upstream 12224 true SL2.50ch12: 627271-639494 Solanum lycopersicum
Solyc12g006030.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 629495-639494 Solanum lycopersicum
Solyc12g006030.1 10.0kb downstream 10.0kb downstream 12224 true SL2.50ch12: 617271-629494 Solanum lycopersicum
Solyc12g006030.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 617271-627270 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474258 5263 Asterids View MSA
123737429 5271 Pentapetalae View MSA
122790972 5272 Eudicot View MSA
122044343 5273 Angiosperm View MSA
121351641 5274 Embryophyte View MSA
123425114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain