Gene : Solyc12g009800.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) 3.1.3.2//3.1.3.41//3.1.3.60 - Acid phosphatase / Phosphomonoesterase // 4-nitrophenylphosphatase // Phosphoenolpyruvate phosphatase Description:  Purple acid phosphatase 3 (AHRD V1 ***- Q6J5M8_SOLTU); contains Interpro domain(s) IPR015914 Purple acid phosphatase, N-terminal
Genomic Order:  381 Name:  ? Solyc12g009800.1
Secondary Identifier:  ? PAC:36148992
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5083 Solanum lycopersicum pathologic  
Slycopersicum PWY-6348 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g009800.1 0.5kb upstream 0.5kb upstream 4270 true SL2.50ch12: 3005117-3009386 Solanum lycopersicum
Solyc12g009800.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 3008887-3009386 Solanum lycopersicum
Solyc12g009800.1 0.5kb downstream 0.5kb downstream 4270 true SL2.50ch12: 3004617-3008886 Solanum lycopersicum
Solyc12g009800.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 3004617-3005116 Solanum lycopersicum
Solyc12g009800.1 1.0kb upstream 1.0kb upstream 4770 true SL2.50ch12: 3005117-3009886 Solanum lycopersicum
Solyc12g009800.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 3008887-3009886 Solanum lycopersicum
Solyc12g009800.1 1.0kb downstream 1.0kb downstream 4770 true SL2.50ch12: 3004117-3008886 Solanum lycopersicum
Solyc12g009800.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 3004117-3005116 Solanum lycopersicum
Solyc12g009800.1 2.0kb upstream 2.0kb upstream 5770 true SL2.50ch12: 3005117-3010886 Solanum lycopersicum
Solyc12g009800.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 3008887-3010886 Solanum lycopersicum
Solyc12g009800.1 2.0kb downstream 2.0kb downstream 5770 true SL2.50ch12: 3003117-3008886 Solanum lycopersicum
Solyc12g009800.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 3003117-3005116 Solanum lycopersicum
Solyc12g009800.1 5.0kb upstream 5.0kb upstream 8770 true SL2.50ch12: 3005117-3013886 Solanum lycopersicum
Solyc12g009800.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 3008887-3013886 Solanum lycopersicum
Solyc12g009800.1 5.0kb downstream 5.0kb downstream 8770 true SL2.50ch12: 3000117-3008886 Solanum lycopersicum
Solyc12g009800.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 3000117-3005116 Solanum lycopersicum
Solyc12g009800.1 10.0kb upstream 10.0kb upstream 13770 true SL2.50ch12: 3005117-3018886 Solanum lycopersicum
Solyc12g009800.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 3008887-3018886 Solanum lycopersicum
Solyc12g009800.1 10.0kb downstream 10.0kb downstream 13770 true SL2.50ch12: 2995117-3008886 Solanum lycopersicum
Solyc12g009800.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 2995117-3005116 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121386837 5263 Asterids View MSA
123747011 5271 Pentapetalae View MSA
122795635 5272 Eudicot View MSA
122047319 5273 Angiosperm View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain