Gene : Solyc12g008340.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11062:SF84 - EXOSTOSIN FAMILY PROTEIN Description:  Exostosin family protein (AHRD V1 ***- D7LZA5_ARALY); contains Interpro domain(s) IPR004263 Exostosin-like
Genomic Order:  235 Name:  ? Solyc12g008340.1
Secondary Identifier:  ? PAC:36148637
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5980 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g008340.1 0.5kb upstream 0.5kb upstream 3497 true SL2.50ch12: 1742568-1746064 Solanum lycopersicum
Solyc12g008340.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 1742568-1743067 Solanum lycopersicum
Solyc12g008340.1 0.5kb downstream 0.5kb downstream 3497 true SL2.50ch12: 1743068-1746564 Solanum lycopersicum
Solyc12g008340.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 1746065-1746564 Solanum lycopersicum
Solyc12g008340.1 1.0kb upstream 1.0kb upstream 3997 true SL2.50ch12: 1742068-1746064 Solanum lycopersicum
Solyc12g008340.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 1742068-1743067 Solanum lycopersicum
Solyc12g008340.1 1.0kb downstream 1.0kb downstream 3997 true SL2.50ch12: 1743068-1747064 Solanum lycopersicum
Solyc12g008340.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 1746065-1747064 Solanum lycopersicum
Solyc12g008340.1 2.0kb upstream 2.0kb upstream 4997 true SL2.50ch12: 1741068-1746064 Solanum lycopersicum
Solyc12g008340.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 1741068-1743067 Solanum lycopersicum
Solyc12g008340.1 2.0kb downstream 2.0kb downstream 4997 true SL2.50ch12: 1743068-1748064 Solanum lycopersicum
Solyc12g008340.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 1746065-1748064 Solanum lycopersicum
Solyc12g008340.1 5.0kb upstream 5.0kb upstream 7997 true SL2.50ch12: 1738068-1746064 Solanum lycopersicum
Solyc12g008340.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 1738068-1743067 Solanum lycopersicum
Solyc12g008340.1 5.0kb downstream 5.0kb downstream 7997 true SL2.50ch12: 1743068-1751064 Solanum lycopersicum
Solyc12g008340.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 1746065-1751064 Solanum lycopersicum
Solyc12g008340.1 10.0kb upstream 10.0kb upstream 12997 true SL2.50ch12: 1733068-1746064 Solanum lycopersicum
Solyc12g008340.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 1733068-1743067 Solanum lycopersicum
Solyc12g008340.1 10.0kb downstream 10.0kb downstream 12997 true SL2.50ch12: 1743068-1756064 Solanum lycopersicum
Solyc12g008340.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 1746065-1756064 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473397 5263 Asterids View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain