Gene : Solyc12g007180.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Description:  Tesmin/TSO1-like CXC domain-containing protein (AHRD V1 *--- Q54TZ5_DICDI); contains Interpro domain(s) IPR005172 Tesmin/TSO1-like, CXC
Genomic Order:  218 Name:  ? Solyc12g007180.1
Secondary Identifier:  ? PAC:36147906
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g007180.1 0.5kb upstream 0.5kb upstream 9322 true SL2.50ch12: 1616773-1626094 Solanum lycopersicum
Solyc12g007180.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 1625595-1626094 Solanum lycopersicum
Solyc12g007180.1 0.5kb downstream 0.5kb downstream 9322 true SL2.50ch12: 1616273-1625594 Solanum lycopersicum
Solyc12g007180.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 1616273-1616772 Solanum lycopersicum
Solyc12g007180.1 1.0kb upstream 1.0kb upstream 9822 true SL2.50ch12: 1616773-1626594 Solanum lycopersicum
Solyc12g007180.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 1625595-1626594 Solanum lycopersicum
Solyc12g007180.1 1.0kb downstream 1.0kb downstream 9822 true SL2.50ch12: 1615773-1625594 Solanum lycopersicum
Solyc12g007180.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 1615773-1616772 Solanum lycopersicum
Solyc12g007180.1 2.0kb upstream 2.0kb upstream 10822 true SL2.50ch12: 1616773-1627594 Solanum lycopersicum
Solyc12g007180.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 1625595-1627594 Solanum lycopersicum
Solyc12g007180.1 2.0kb downstream 2.0kb downstream 10822 true SL2.50ch12: 1614773-1625594 Solanum lycopersicum
Solyc12g007180.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 1614773-1616772 Solanum lycopersicum
Solyc12g007180.1 5.0kb upstream 5.0kb upstream 13822 true SL2.50ch12: 1616773-1630594 Solanum lycopersicum
Solyc12g007180.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 1625595-1630594 Solanum lycopersicum
Solyc12g007180.1 5.0kb downstream 5.0kb downstream 13822 true SL2.50ch12: 1611773-1625594 Solanum lycopersicum
Solyc12g007180.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 1611773-1616772 Solanum lycopersicum
Solyc12g007180.1 10.0kb upstream 10.0kb upstream 18822 true SL2.50ch12: 1616773-1635594 Solanum lycopersicum
Solyc12g007180.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 1625595-1635594 Solanum lycopersicum
Solyc12g007180.1 10.0kb downstream 10.0kb downstream 18822 true SL2.50ch12: 1606773-1625594 Solanum lycopersicum
Solyc12g007180.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 1606773-1616772 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475688 5263 Asterids View MSA
123746618 5271 Pentapetalae View MSA
122795390 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain