Gene : Solyc12g008870.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR12072:SF4 - CWF19-LIKE PROTEIN 1 Description:  CwfJ domain-containing protein (AHRD V1 **-- B6JX79_SCHJY); contains Interpro domain(s) IPR006768 Protein similar to CwfJ, C-terminal 1
Genomic Order:  288 Name:  ? Solyc12g008870.1
Secondary Identifier:  ? PAC:36148646
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g008870.1 0.5kb upstream 0.5kb upstream 3339 true SL2.50ch12: 2199225-2202563 Solanum lycopersicum
Solyc12g008870.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 2202064-2202563 Solanum lycopersicum
Solyc12g008870.1 0.5kb downstream 0.5kb downstream 3339 true SL2.50ch12: 2198725-2202063 Solanum lycopersicum
Solyc12g008870.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 2198725-2199224 Solanum lycopersicum
Solyc12g008870.1 1.0kb upstream 1.0kb upstream 3839 true SL2.50ch12: 2199225-2203063 Solanum lycopersicum
Solyc12g008870.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 2202064-2203063 Solanum lycopersicum
Solyc12g008870.1 1.0kb downstream 1.0kb downstream 3839 true SL2.50ch12: 2198225-2202063 Solanum lycopersicum
Solyc12g008870.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 2198225-2199224 Solanum lycopersicum
Solyc12g008870.1 2.0kb upstream 2.0kb upstream 4839 true SL2.50ch12: 2199225-2204063 Solanum lycopersicum
Solyc12g008870.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 2202064-2204063 Solanum lycopersicum
Solyc12g008870.1 2.0kb downstream 2.0kb downstream 4839 true SL2.50ch12: 2197225-2202063 Solanum lycopersicum
Solyc12g008870.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 2197225-2199224 Solanum lycopersicum
Solyc12g008870.1 5.0kb upstream 5.0kb upstream 7839 true SL2.50ch12: 2199225-2207063 Solanum lycopersicum
Solyc12g008870.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 2202064-2207063 Solanum lycopersicum
Solyc12g008870.1 5.0kb downstream 5.0kb downstream 7839 true SL2.50ch12: 2194225-2202063 Solanum lycopersicum
Solyc12g008870.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 2194225-2199224 Solanum lycopersicum
Solyc12g008870.1 10.0kb upstream 10.0kb upstream 12839 true SL2.50ch12: 2199225-2212063 Solanum lycopersicum
Solyc12g008870.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 2202064-2212063 Solanum lycopersicum
Solyc12g008870.1 10.0kb downstream 10.0kb downstream 12839 true SL2.50ch12: 2189225-2202063 Solanum lycopersicum
Solyc12g008870.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 2189225-2199224 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121372271 5263 Asterids Singleton cluster - no MSA
123752014 5271 Pentapetalae View MSA
122774307 5272 Eudicot View MSA
122048993 5273 Angiosperm View MSA
121311199 5274 Embryophyte View MSA
123426244 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain