Gene : Solyc12g008630.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K01412 - mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64] (PMPCA, MAS2) Description:  Mitochondrial processing peptidase alpha subunit (AHRD V1 ***- Q948V5_MORAL); contains Interpro domain(s) IPR011237 Peptidase M16, core
Genomic Order:  264 Name:  ? Solyc12g008630.1
Secondary Identifier:  ? PAC:36148188
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-3781 Solanum lycopersicum pathologic  
Slycopersicum PWY-7279 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g008630.1 0.5kb upstream 0.5kb upstream 7980 true SL2.50ch12: 2007849-2015828 Solanum lycopersicum
Solyc12g008630.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 2015329-2015828 Solanum lycopersicum
Solyc12g008630.1 0.5kb downstream 0.5kb downstream 7980 true SL2.50ch12: 2007349-2015328 Solanum lycopersicum
Solyc12g008630.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 2007349-2007848 Solanum lycopersicum
Solyc12g008630.1 1.0kb upstream 1.0kb upstream 8480 true SL2.50ch12: 2007849-2016328 Solanum lycopersicum
Solyc12g008630.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 2015329-2016328 Solanum lycopersicum
Solyc12g008630.1 1.0kb downstream 1.0kb downstream 8480 true SL2.50ch12: 2006849-2015328 Solanum lycopersicum
Solyc12g008630.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 2006849-2007848 Solanum lycopersicum
Solyc12g008630.1 2.0kb upstream 2.0kb upstream 9480 true SL2.50ch12: 2007849-2017328 Solanum lycopersicum
Solyc12g008630.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 2015329-2017328 Solanum lycopersicum
Solyc12g008630.1 2.0kb downstream 2.0kb downstream 9480 true SL2.50ch12: 2005849-2015328 Solanum lycopersicum
Solyc12g008630.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 2005849-2007848 Solanum lycopersicum
Solyc12g008630.1 5.0kb upstream 5.0kb upstream 12480 true SL2.50ch12: 2007849-2020328 Solanum lycopersicum
Solyc12g008630.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 2015329-2020328 Solanum lycopersicum
Solyc12g008630.1 5.0kb downstream 5.0kb downstream 12480 true SL2.50ch12: 2002849-2015328 Solanum lycopersicum
Solyc12g008630.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 2002849-2007848 Solanum lycopersicum
Solyc12g008630.1 10.0kb upstream 10.0kb upstream 17480 true SL2.50ch12: 2007849-2025328 Solanum lycopersicum
Solyc12g008630.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 2015329-2025328 Solanum lycopersicum
Solyc12g008630.1 10.0kb downstream 10.0kb downstream 17480 true SL2.50ch12: 1997849-2015328 Solanum lycopersicum
Solyc12g008630.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 1997849-2007848 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
121476207 5263 Asterids View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain