Gene : Solyc04g080980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) Description:  Coatomer alpha subunit-like protein (AHRD V1 **-- Q70I39_LOTJA); contains Interpro domain(s) IPR016391 Coatomer, alpha subunit
Genomic Order:  2540 Name:  ? Solyc04g080980.2
Secondary Identifier:  ? PAC:36141989
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g080980.2 0.5kb upstream 0.5kb upstream 6084 true SL2.50ch04: 65042155-65048238 Solanum lycopersicum
Solyc04g080980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 65047739-65048238 Solanum lycopersicum
Solyc04g080980.2 0.5kb downstream 0.5kb downstream 6084 true SL2.50ch04: 65041655-65047738 Solanum lycopersicum
Solyc04g080980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 65041655-65042154 Solanum lycopersicum
Solyc04g080980.2 1.0kb upstream 1.0kb upstream 6584 true SL2.50ch04: 65042155-65048738 Solanum lycopersicum
Solyc04g080980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 65047739-65048738 Solanum lycopersicum
Solyc04g080980.2 1.0kb downstream 1.0kb downstream 6584 true SL2.50ch04: 65041155-65047738 Solanum lycopersicum
Solyc04g080980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 65041155-65042154 Solanum lycopersicum
Solyc04g080980.2 2.0kb upstream 2.0kb upstream 7584 true SL2.50ch04: 65042155-65049738 Solanum lycopersicum
Solyc04g080980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 65047739-65049738 Solanum lycopersicum
Solyc04g080980.2 2.0kb downstream 2.0kb downstream 7584 true SL2.50ch04: 65040155-65047738 Solanum lycopersicum
Solyc04g080980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 65040155-65042154 Solanum lycopersicum
Solyc04g080980.2 5.0kb upstream 5.0kb upstream 10584 true SL2.50ch04: 65042155-65052738 Solanum lycopersicum
Solyc04g080980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 65047739-65052738 Solanum lycopersicum
Solyc04g080980.2 5.0kb downstream 5.0kb downstream 10584 true SL2.50ch04: 65037155-65047738 Solanum lycopersicum
Solyc04g080980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 65037155-65042154 Solanum lycopersicum
Solyc04g080980.2 10.0kb upstream 10.0kb upstream 15584 true SL2.50ch04: 65042155-65057738 Solanum lycopersicum
Solyc04g080980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 65047739-65057738 Solanum lycopersicum
Solyc04g080980.2 10.0kb downstream 10.0kb downstream 15584 true SL2.50ch04: 65032155-65047738 Solanum lycopersicum
Solyc04g080980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 65032155-65042154 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479194 5263 Asterids View MSA
123750852 5271 Pentapetalae View MSA
122787725 5272 Eudicot View MSA
122046406 5273 Angiosperm View MSA
121345159 5274 Embryophyte View MSA
123428224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain