Gene : Solyc04g080700.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED Description:  Wound responsive protein (Fragment) (AHRD V1 **-- A6N0L4_ORYSI); contains Interpro domain(s) IPR003729 Protein of unknown function DUF151
Genomic Order:  2512 Name:  ? Solyc04g080700.2
Secondary Identifier:  ? PAC:36142094
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g080700.2 0.5kb upstream 0.5kb upstream 3538 true SL2.50ch04: 64790456-64793993 Solanum lycopersicum
Solyc04g080700.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 64793494-64793993 Solanum lycopersicum
Solyc04g080700.2 0.5kb downstream 0.5kb downstream 3538 true SL2.50ch04: 64789956-64793493 Solanum lycopersicum
Solyc04g080700.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 64789956-64790455 Solanum lycopersicum
Solyc04g080700.2 1.0kb upstream 1.0kb upstream 4038 true SL2.50ch04: 64790456-64794493 Solanum lycopersicum
Solyc04g080700.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 64793494-64794493 Solanum lycopersicum
Solyc04g080700.2 1.0kb downstream 1.0kb downstream 4038 true SL2.50ch04: 64789456-64793493 Solanum lycopersicum
Solyc04g080700.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 64789456-64790455 Solanum lycopersicum
Solyc04g080700.2 2.0kb upstream 2.0kb upstream 5038 true SL2.50ch04: 64790456-64795493 Solanum lycopersicum
Solyc04g080700.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 64793494-64795493 Solanum lycopersicum
Solyc04g080700.2 2.0kb downstream 2.0kb downstream 5038 true SL2.50ch04: 64788456-64793493 Solanum lycopersicum
Solyc04g080700.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 64788456-64790455 Solanum lycopersicum
Solyc04g080700.2 5.0kb upstream 5.0kb upstream 8038 true SL2.50ch04: 64790456-64798493 Solanum lycopersicum
Solyc04g080700.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 64793494-64798493 Solanum lycopersicum
Solyc04g080700.2 5.0kb downstream 5.0kb downstream 8038 true SL2.50ch04: 64785456-64793493 Solanum lycopersicum
Solyc04g080700.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 64785456-64790455 Solanum lycopersicum
Solyc04g080700.2 10.0kb upstream 10.0kb upstream 13038 true SL2.50ch04: 64790456-64803493 Solanum lycopersicum
Solyc04g080700.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 64793494-64803493 Solanum lycopersicum
Solyc04g080700.2 10.0kb downstream 10.0kb downstream 13038 true SL2.50ch04: 64780456-64793493 Solanum lycopersicum
Solyc04g080700.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 64780456-64790455 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121384884 5263 Asterids View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain