Gene : Solyc04g082770.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) KOG4207 - Predicted splicing factor, SR protein superfamily Description:  RNA-binding protein 68390-68829 (AHRD V1 *--* Q9C805_ARATH); contains Interpro domain(s) IPR000504 RNA recognition motif, RNP-1
Genomic Order:  2719 Name:  ? Solyc04g082770.2
Secondary Identifier:  ? PAC:36141947
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g082770.2 0.5kb upstream 0.5kb upstream 4188 true SL2.50ch04: 66324324-66328511 Solanum lycopersicum
Solyc04g082770.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 66328012-66328511 Solanum lycopersicum
Solyc04g082770.2 0.5kb downstream 0.5kb downstream 4188 true SL2.50ch04: 66323824-66328011 Solanum lycopersicum
Solyc04g082770.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 66323824-66324323 Solanum lycopersicum
Solyc04g082770.2 1.0kb upstream 1.0kb upstream 4688 true SL2.50ch04: 66324324-66329011 Solanum lycopersicum
Solyc04g082770.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 66328012-66329011 Solanum lycopersicum
Solyc04g082770.2 1.0kb downstream 1.0kb downstream 4688 true SL2.50ch04: 66323324-66328011 Solanum lycopersicum
Solyc04g082770.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 66323324-66324323 Solanum lycopersicum
Solyc04g082770.2 2.0kb upstream 2.0kb upstream 5688 true SL2.50ch04: 66324324-66330011 Solanum lycopersicum
Solyc04g082770.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 66328012-66330011 Solanum lycopersicum
Solyc04g082770.2 2.0kb downstream 2.0kb downstream 5688 true SL2.50ch04: 66322324-66328011 Solanum lycopersicum
Solyc04g082770.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 66322324-66324323 Solanum lycopersicum
Solyc04g082770.2 5.0kb upstream 5.0kb upstream 8688 true SL2.50ch04: 66324324-66333011 Solanum lycopersicum
Solyc04g082770.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 66328012-66333011 Solanum lycopersicum
Solyc04g082770.2 5.0kb downstream 5.0kb downstream 8688 true SL2.50ch04: 66319324-66328011 Solanum lycopersicum
Solyc04g082770.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 66319324-66324323 Solanum lycopersicum
Solyc04g082770.2 10.0kb upstream 10.0kb upstream 13688 true SL2.50ch04: 66324324-66338011 Solanum lycopersicum
Solyc04g082770.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 66328012-66338011 Solanum lycopersicum
Solyc04g082770.2 10.0kb downstream 10.0kb downstream 13688 true SL2.50ch04: 66314324-66328011 Solanum lycopersicum
Solyc04g082770.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 66314324-66324323 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466886 5263 Asterids View MSA
123753453 5271 Pentapetalae View MSA
122797686 5272 Eudicot View MSA
122043296 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121350049 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain