Gene : Solyc04g082670.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21049:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1A Description:  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (AHRD V1 **** C0HAM9_SALSA); contains Interpro domain(s) IPR007676 Ribophorin I
Genomic Order:  2709 Name:  ? Solyc04g082670.2
Secondary Identifier:  ? PAC:36143889
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g082670.2 0.5kb upstream 0.5kb upstream 6044 true SL2.50ch04: 66271030-66277073 Solanum lycopersicum
Solyc04g082670.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 66271030-66271529 Solanum lycopersicum
Solyc04g082670.2 0.5kb downstream 0.5kb downstream 6044 true SL2.50ch04: 66271530-66277573 Solanum lycopersicum
Solyc04g082670.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 66277074-66277573 Solanum lycopersicum
Solyc04g082670.2 1.0kb upstream 1.0kb upstream 6544 true SL2.50ch04: 66270530-66277073 Solanum lycopersicum
Solyc04g082670.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 66270530-66271529 Solanum lycopersicum
Solyc04g082670.2 1.0kb downstream 1.0kb downstream 6544 true SL2.50ch04: 66271530-66278073 Solanum lycopersicum
Solyc04g082670.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 66277074-66278073 Solanum lycopersicum
Solyc04g082670.2 2.0kb upstream 2.0kb upstream 7544 true SL2.50ch04: 66269530-66277073 Solanum lycopersicum
Solyc04g082670.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 66269530-66271529 Solanum lycopersicum
Solyc04g082670.2 2.0kb downstream 2.0kb downstream 7544 true SL2.50ch04: 66271530-66279073 Solanum lycopersicum
Solyc04g082670.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 66277074-66279073 Solanum lycopersicum
Solyc04g082670.2 5.0kb upstream 5.0kb upstream 10544 true SL2.50ch04: 66266530-66277073 Solanum lycopersicum
Solyc04g082670.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 66266530-66271529 Solanum lycopersicum
Solyc04g082670.2 5.0kb downstream 5.0kb downstream 10544 true SL2.50ch04: 66271530-66282073 Solanum lycopersicum
Solyc04g082670.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 66277074-66282073 Solanum lycopersicum
Solyc04g082670.2 10.0kb upstream 10.0kb upstream 15544 true SL2.50ch04: 66261530-66277073 Solanum lycopersicum
Solyc04g082670.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 66261530-66271529 Solanum lycopersicum
Solyc04g082670.2 10.0kb downstream 10.0kb downstream 15544 true SL2.50ch04: 66271530-66287073 Solanum lycopersicum
Solyc04g082670.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 66277074-66287073 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467857 5263 Asterids View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain