Gene : Solyc12g005090.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR13673 - ESOPHAGEAL CANCER ASSOCIATED PROTEIN Description:  Unknown Protein (AHRD V1)
Genomic Order:  10 Name:  ? Solyc12g005090.1
Secondary Identifier:  ? PAC:36147179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g005090.1 0.5kb upstream 0.5kb upstream 4472 true SL2.50ch12: 41951-46422 Solanum lycopersicum
Solyc12g005090.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 45923-46422 Solanum lycopersicum
Solyc12g005090.1 0.5kb downstream 0.5kb downstream 4472 true SL2.50ch12: 41451-45922 Solanum lycopersicum
Solyc12g005090.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 41451-41950 Solanum lycopersicum
Solyc12g005090.1 1.0kb upstream 1.0kb upstream 4972 true SL2.50ch12: 41951-46922 Solanum lycopersicum
Solyc12g005090.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 45923-46922 Solanum lycopersicum
Solyc12g005090.1 1.0kb downstream 1.0kb downstream 4972 true SL2.50ch12: 40951-45922 Solanum lycopersicum
Solyc12g005090.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 40951-41950 Solanum lycopersicum
Solyc12g005090.1 2.0kb upstream 2.0kb upstream 5972 true SL2.50ch12: 41951-47922 Solanum lycopersicum
Solyc12g005090.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 45923-47922 Solanum lycopersicum
Solyc12g005090.1 2.0kb downstream 2.0kb downstream 5972 true SL2.50ch12: 39951-45922 Solanum lycopersicum
Solyc12g005090.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 39951-41950 Solanum lycopersicum
Solyc12g005090.1 5.0kb upstream 5.0kb upstream 8972 true SL2.50ch12: 41951-50922 Solanum lycopersicum
Solyc12g005090.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 45923-50922 Solanum lycopersicum
Solyc12g005090.1 5.0kb downstream 5.0kb downstream 8972 true SL2.50ch12: 36951-45922 Solanum lycopersicum
Solyc12g005090.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 36951-41950 Solanum lycopersicum
Solyc12g005090.1 10.0kb upstream 10.0kb upstream 13972 true SL2.50ch12: 41951-55922 Solanum lycopersicum
Solyc12g005090.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 45923-55922 Solanum lycopersicum
Solyc12g005090.1 10.0kb downstream 10.0kb downstream 13972 true SL2.50ch12: 31951-45922 Solanum lycopersicum
Solyc12g005090.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 31951-41950 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121371889 5263 Asterids Singleton cluster - no MSA
123654448 5271 Pentapetalae Singleton cluster - no MSA
122688369 5272 Eudicot Singleton cluster - no MSA
122048637 5273 Angiosperm View MSA
121311050 5274 Embryophyte View MSA
123348404 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain