Gene : Solyc12g005020.1 S. lycopersicum ITAG2.4
Defline:  (1 of 124) PTHR14155 - RING FINGER DOMAIN-CONTAINING Description:  Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
Genomic Order:  3 Name:  ? Solyc12g005020.1
Secondary Identifier:  ? PAC:36147557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g005020.1 0.5kb upstream 0.5kb upstream 1635 true SL2.50ch12: 10618-12252 Solanum lycopersicum
Solyc12g005020.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 11753-12252 Solanum lycopersicum
Solyc12g005020.1 0.5kb downstream 0.5kb downstream 1635 true SL2.50ch12: 10118-11752 Solanum lycopersicum
Solyc12g005020.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 10118-10617 Solanum lycopersicum
Solyc12g005020.1 1.0kb upstream 1.0kb upstream 2135 true SL2.50ch12: 10618-12752 Solanum lycopersicum
Solyc12g005020.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 11753-12752 Solanum lycopersicum
Solyc12g005020.1 1.0kb downstream 1.0kb downstream 2135 true SL2.50ch12: 9618-11752 Solanum lycopersicum
Solyc12g005020.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 9618-10617 Solanum lycopersicum
Solyc12g005020.1 2.0kb upstream 2.0kb upstream 3135 true SL2.50ch12: 10618-13752 Solanum lycopersicum
Solyc12g005020.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 11753-13752 Solanum lycopersicum
Solyc12g005020.1 2.0kb downstream 2.0kb downstream 3135 true SL2.50ch12: 8618-11752 Solanum lycopersicum
Solyc12g005020.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 8618-10617 Solanum lycopersicum
Solyc12g005020.1 5.0kb upstream 5.0kb upstream 6135 true SL2.50ch12: 10618-16752 Solanum lycopersicum
Solyc12g005020.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 11753-16752 Solanum lycopersicum
Solyc12g005020.1 5.0kb downstream 5.0kb downstream 6135 true SL2.50ch12: 5618-11752 Solanum lycopersicum
Solyc12g005020.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 5618-10617 Solanum lycopersicum
Solyc12g005020.1 10.0kb upstream 10.0kb upstream 11135 true SL2.50ch12: 10618-21752 Solanum lycopersicum
Solyc12g005020.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 11753-21752 Solanum lycopersicum
Solyc12g005020.1 10.0kb downstream 10.0kb downstream 11135 true SL2.50ch12: 618-11752 Solanum lycopersicum
Solyc12g005020.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 618-10617 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791916 5273 Angiosperm View MSA
121467219 5263 Asterids View MSA
123747465 5271 Pentapetalae View MSA
122795286 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121063185 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain