Gene : Solyc04g082980.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12600 - superkiller protein 3 (SKI3, TTC37) Description:  TPR repeat-containing protein (AHRD V1 *--- Q2UQ52_ASPOR); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Genomic Order:  2739 Name:  ? Solyc04g082980.1
Secondary Identifier:  ? PAC:36143102
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g082980.1 0.5kb upstream 0.5kb upstream 17979 true SL2.50ch04: 66431479-66449457 Solanum lycopersicum
Solyc04g082980.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 66431479-66431978 Solanum lycopersicum
Solyc04g082980.1 0.5kb downstream 0.5kb downstream 17979 true SL2.50ch04: 66431979-66449957 Solanum lycopersicum
Solyc04g082980.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 66449458-66449957 Solanum lycopersicum
Solyc04g082980.1 1.0kb upstream 1.0kb upstream 18479 true SL2.50ch04: 66430979-66449457 Solanum lycopersicum
Solyc04g082980.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 66430979-66431978 Solanum lycopersicum
Solyc04g082980.1 1.0kb downstream 1.0kb downstream 18479 true SL2.50ch04: 66431979-66450457 Solanum lycopersicum
Solyc04g082980.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 66449458-66450457 Solanum lycopersicum
Solyc04g082980.1 2.0kb upstream 2.0kb upstream 19479 true SL2.50ch04: 66429979-66449457 Solanum lycopersicum
Solyc04g082980.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 66429979-66431978 Solanum lycopersicum
Solyc04g082980.1 2.0kb downstream 2.0kb downstream 19479 true SL2.50ch04: 66431979-66451457 Solanum lycopersicum
Solyc04g082980.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 66449458-66451457 Solanum lycopersicum
Solyc04g082980.1 5.0kb upstream 5.0kb upstream 22479 true SL2.50ch04: 66426979-66449457 Solanum lycopersicum
Solyc04g082980.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 66426979-66431978 Solanum lycopersicum
Solyc04g082980.1 5.0kb downstream 5.0kb downstream 22479 true SL2.50ch04: 66431979-66454457 Solanum lycopersicum
Solyc04g082980.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 66449458-66454457 Solanum lycopersicum
Solyc04g082980.1 10.0kb upstream 10.0kb upstream 27479 true SL2.50ch04: 66421979-66449457 Solanum lycopersicum
Solyc04g082980.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 66421979-66431978 Solanum lycopersicum
Solyc04g082980.1 10.0kb downstream 10.0kb downstream 27479 true SL2.50ch04: 66431979-66459457 Solanum lycopersicum
Solyc04g082980.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 66449458-66459457 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467931 5263 Asterids View MSA
123737260 5271 Pentapetalae View MSA
122791568 5272 Eudicot View MSA
122046967 5273 Angiosperm View MSA
121344761 5274 Embryophyte View MSA
123425993 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain