Gene : Solyc04g082810.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31100:SF5 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 29-RELATED Description:  AT-hook DNA-binding protein (Fragment) (AHRD V1 **-* A1DR81_CATRO); contains Interpro domain(s) IPR014476 Predicted AT-hook DNA-binding
Genomic Order:  2723 Name:  ? Solyc04g082810.2
Secondary Identifier:  ? PAC:36142123
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g082810.2 0.5kb upstream 0.5kb upstream 1689 true SL2.50ch04: 66346939-66348627 Solanum lycopersicum
Solyc04g082810.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 66346939-66347438 Solanum lycopersicum
Solyc04g082810.2 0.5kb downstream 0.5kb downstream 1689 true SL2.50ch04: 66347439-66349127 Solanum lycopersicum
Solyc04g082810.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 66348628-66349127 Solanum lycopersicum
Solyc04g082810.2 1.0kb upstream 1.0kb upstream 2189 true SL2.50ch04: 66346439-66348627 Solanum lycopersicum
Solyc04g082810.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 66346439-66347438 Solanum lycopersicum
Solyc04g082810.2 1.0kb downstream 1.0kb downstream 2189 true SL2.50ch04: 66347439-66349627 Solanum lycopersicum
Solyc04g082810.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 66348628-66349627 Solanum lycopersicum
Solyc04g082810.2 2.0kb upstream 2.0kb upstream 3189 true SL2.50ch04: 66345439-66348627 Solanum lycopersicum
Solyc04g082810.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 66345439-66347438 Solanum lycopersicum
Solyc04g082810.2 2.0kb downstream 2.0kb downstream 3189 true SL2.50ch04: 66347439-66350627 Solanum lycopersicum
Solyc04g082810.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 66348628-66350627 Solanum lycopersicum
Solyc04g082810.2 5.0kb upstream 5.0kb upstream 6189 true SL2.50ch04: 66342439-66348627 Solanum lycopersicum
Solyc04g082810.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 66342439-66347438 Solanum lycopersicum
Solyc04g082810.2 5.0kb downstream 5.0kb downstream 6189 true SL2.50ch04: 66347439-66353627 Solanum lycopersicum
Solyc04g082810.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 66348628-66353627 Solanum lycopersicum
Solyc04g082810.2 10.0kb upstream 10.0kb upstream 11189 true SL2.50ch04: 66337439-66348627 Solanum lycopersicum
Solyc04g082810.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 66337439-66347438 Solanum lycopersicum
Solyc04g082810.2 10.0kb downstream 10.0kb downstream 11189 true SL2.50ch04: 66347439-66358627 Solanum lycopersicum
Solyc04g082810.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 66348628-66358627 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466338 5263 Asterids View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain