Gene : Solyc04g082040.2 S. lycopersicum ITAG2.4
Defline:  (1 of 8) PF00924 - Mechanosensitive ion channel (MS_channel) Description:  Predicted mechanosensitive ion channel (AHRD V1 *-*- Q2TZV3_ASPOR); contains Interpro domain(s) IPR016688 Membrane protein, At2g17000, predicted
Genomic Order:  2646 Name:  ? Solyc04g082040.2
Secondary Identifier:  ? PAC:36142160
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g082040.2 0.5kb upstream 0.5kb upstream 4995 true SL2.50ch04: 65845701-65850695 Solanum lycopersicum
Solyc04g082040.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 65845701-65846200 Solanum lycopersicum
Solyc04g082040.2 0.5kb downstream 0.5kb downstream 4995 true SL2.50ch04: 65846201-65851195 Solanum lycopersicum
Solyc04g082040.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 65850696-65851195 Solanum lycopersicum
Solyc04g082040.2 1.0kb upstream 1.0kb upstream 5495 true SL2.50ch04: 65845201-65850695 Solanum lycopersicum
Solyc04g082040.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 65845201-65846200 Solanum lycopersicum
Solyc04g082040.2 1.0kb downstream 1.0kb downstream 5495 true SL2.50ch04: 65846201-65851695 Solanum lycopersicum
Solyc04g082040.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 65850696-65851695 Solanum lycopersicum
Solyc04g082040.2 2.0kb upstream 2.0kb upstream 6495 true SL2.50ch04: 65844201-65850695 Solanum lycopersicum
Solyc04g082040.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 65844201-65846200 Solanum lycopersicum
Solyc04g082040.2 2.0kb downstream 2.0kb downstream 6495 true SL2.50ch04: 65846201-65852695 Solanum lycopersicum
Solyc04g082040.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 65850696-65852695 Solanum lycopersicum
Solyc04g082040.2 5.0kb upstream 5.0kb upstream 9495 true SL2.50ch04: 65841201-65850695 Solanum lycopersicum
Solyc04g082040.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 65841201-65846200 Solanum lycopersicum
Solyc04g082040.2 5.0kb downstream 5.0kb downstream 9495 true SL2.50ch04: 65846201-65855695 Solanum lycopersicum
Solyc04g082040.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 65850696-65855695 Solanum lycopersicum
Solyc04g082040.2 10.0kb upstream 10.0kb upstream 14495 true SL2.50ch04: 65836201-65850695 Solanum lycopersicum
Solyc04g082040.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 65836201-65846200 Solanum lycopersicum
Solyc04g082040.2 10.0kb downstream 10.0kb downstream 14495 true SL2.50ch04: 65846201-65860695 Solanum lycopersicum
Solyc04g082040.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 65850696-65860695 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473479 5263 Asterids View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain