Gene : Solyc04g082000.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR18896//PTHR18896:SF72 - PHOSPHOLIPASE D // SUBFAMILY NOT NAMED Description:  Phospholipase D (AHRD V1 **** Q6AVR2_ORYSJ); contains Interpro domain(s) IPR011402 Phospholipase D, plant
Genomic Order:  2642 Name:  ? Solyc04g082000.2
Secondary Identifier:  ? PAC:36142618
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPASYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3561 Solanum lycopersicum pathologic  
Slycopersicum PWY-7039 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g082000.2 0.5kb upstream 0.5kb upstream 8787 true SL2.50ch04: 65816951-65825737 Solanum lycopersicum
Solyc04g082000.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 65816951-65817450 Solanum lycopersicum
Solyc04g082000.2 0.5kb downstream 0.5kb downstream 8787 true SL2.50ch04: 65817451-65826237 Solanum lycopersicum
Solyc04g082000.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 65825738-65826237 Solanum lycopersicum
Solyc04g082000.2 1.0kb upstream 1.0kb upstream 9287 true SL2.50ch04: 65816451-65825737 Solanum lycopersicum
Solyc04g082000.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 65816451-65817450 Solanum lycopersicum
Solyc04g082000.2 1.0kb downstream 1.0kb downstream 9287 true SL2.50ch04: 65817451-65826737 Solanum lycopersicum
Solyc04g082000.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 65825738-65826737 Solanum lycopersicum
Solyc04g082000.2 2.0kb upstream 2.0kb upstream 10287 true SL2.50ch04: 65815451-65825737 Solanum lycopersicum
Solyc04g082000.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 65815451-65817450 Solanum lycopersicum
Solyc04g082000.2 2.0kb downstream 2.0kb downstream 10287 true SL2.50ch04: 65817451-65827737 Solanum lycopersicum
Solyc04g082000.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 65825738-65827737 Solanum lycopersicum
Solyc04g082000.2 5.0kb upstream 5.0kb upstream 13287 true SL2.50ch04: 65812451-65825737 Solanum lycopersicum
Solyc04g082000.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 65812451-65817450 Solanum lycopersicum
Solyc04g082000.2 5.0kb downstream 5.0kb downstream 13287 true SL2.50ch04: 65817451-65830737 Solanum lycopersicum
Solyc04g082000.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 65825738-65830737 Solanum lycopersicum
Solyc04g082000.2 10.0kb upstream 10.0kb upstream 18287 true SL2.50ch04: 65807451-65825737 Solanum lycopersicum
Solyc04g082000.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 65807451-65817450 Solanum lycopersicum
Solyc04g082000.2 10.0kb downstream 10.0kb downstream 18287 true SL2.50ch04: 65817451-65835737 Solanum lycopersicum
Solyc04g082000.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 65825738-65835737 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477083 5263 Asterids View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain