Gene : Solyc04g082250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Description:  ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment) (AHRD V1 ***- FTSH_CAPAN); contains Interpro domain(s) IPR005936 Peptidase M41, FtsH
Genomic Order:  2667 Name:  ? Solyc04g082250.2
Secondary Identifier:  ? PAC:36141655
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g082250.2 0.5kb upstream 0.5kb upstream 4318 true SL2.50ch04: 65980080-65984397 Solanum lycopersicum
Solyc04g082250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 65980080-65980579 Solanum lycopersicum
Solyc04g082250.2 0.5kb downstream 0.5kb downstream 4318 true SL2.50ch04: 65980580-65984897 Solanum lycopersicum
Solyc04g082250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 65984398-65984897 Solanum lycopersicum
Solyc04g082250.2 1.0kb upstream 1.0kb upstream 4818 true SL2.50ch04: 65979580-65984397 Solanum lycopersicum
Solyc04g082250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 65979580-65980579 Solanum lycopersicum
Solyc04g082250.2 1.0kb downstream 1.0kb downstream 4818 true SL2.50ch04: 65980580-65985397 Solanum lycopersicum
Solyc04g082250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 65984398-65985397 Solanum lycopersicum
Solyc04g082250.2 2.0kb upstream 2.0kb upstream 5818 true SL2.50ch04: 65978580-65984397 Solanum lycopersicum
Solyc04g082250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 65978580-65980579 Solanum lycopersicum
Solyc04g082250.2 2.0kb downstream 2.0kb downstream 5818 true SL2.50ch04: 65980580-65986397 Solanum lycopersicum
Solyc04g082250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 65984398-65986397 Solanum lycopersicum
Solyc04g082250.2 5.0kb upstream 5.0kb upstream 8818 true SL2.50ch04: 65975580-65984397 Solanum lycopersicum
Solyc04g082250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 65975580-65980579 Solanum lycopersicum
Solyc04g082250.2 5.0kb downstream 5.0kb downstream 8818 true SL2.50ch04: 65980580-65989397 Solanum lycopersicum
Solyc04g082250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 65984398-65989397 Solanum lycopersicum
Solyc04g082250.2 10.0kb upstream 10.0kb upstream 13818 true SL2.50ch04: 65970580-65984397 Solanum lycopersicum
Solyc04g082250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 65970580-65980579 Solanum lycopersicum
Solyc04g082250.2 10.0kb downstream 10.0kb downstream 13818 true SL2.50ch04: 65980580-65994397 Solanum lycopersicum
Solyc04g082250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 65984398-65994397 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480739 5263 Asterids View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain