Gene : Solyc04g078130.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR19957//PTHR19957:SF118 - SYNTAXIN // SUBFAMILY NOT NAMED Description:  Clathrin-coat assembly protein-like (AHRD V1 **-- Q6Z9Z3_ORYSJ); contains Interpro domain(s) IPR015260 Syntaxin 6, N-terminal
Genomic Order:  2260 Name:  ? Solyc04g078130.2
Secondary Identifier:  ? PAC:36142511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g078130.2 0.5kb upstream 0.5kb upstream 7602 true SL2.50ch04: 62958107-62965708 Solanum lycopersicum
Solyc04g078130.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 62958107-62958606 Solanum lycopersicum
Solyc04g078130.2 0.5kb downstream 0.5kb downstream 7602 true SL2.50ch04: 62958607-62966208 Solanum lycopersicum
Solyc04g078130.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 62965709-62966208 Solanum lycopersicum
Solyc04g078130.2 1.0kb upstream 1.0kb upstream 8102 true SL2.50ch04: 62957607-62965708 Solanum lycopersicum
Solyc04g078130.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 62957607-62958606 Solanum lycopersicum
Solyc04g078130.2 1.0kb downstream 1.0kb downstream 8102 true SL2.50ch04: 62958607-62966708 Solanum lycopersicum
Solyc04g078130.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 62965709-62966708 Solanum lycopersicum
Solyc04g078130.2 2.0kb upstream 2.0kb upstream 9102 true SL2.50ch04: 62956607-62965708 Solanum lycopersicum
Solyc04g078130.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 62956607-62958606 Solanum lycopersicum
Solyc04g078130.2 2.0kb downstream 2.0kb downstream 9102 true SL2.50ch04: 62958607-62967708 Solanum lycopersicum
Solyc04g078130.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 62965709-62967708 Solanum lycopersicum
Solyc04g078130.2 5.0kb upstream 5.0kb upstream 12102 true SL2.50ch04: 62953607-62965708 Solanum lycopersicum
Solyc04g078130.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 62953607-62958606 Solanum lycopersicum
Solyc04g078130.2 5.0kb downstream 5.0kb downstream 12102 true SL2.50ch04: 62958607-62970708 Solanum lycopersicum
Solyc04g078130.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 62965709-62970708 Solanum lycopersicum
Solyc04g078130.2 10.0kb upstream 10.0kb upstream 17102 true SL2.50ch04: 62948607-62965708 Solanum lycopersicum
Solyc04g078130.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 62948607-62958606 Solanum lycopersicum
Solyc04g078130.2 10.0kb downstream 10.0kb downstream 17102 true SL2.50ch04: 62958607-62975708 Solanum lycopersicum
Solyc04g078130.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 62965709-62975708 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469780 5263 Asterids View MSA
123743910 5271 Pentapetalae View MSA
122788324 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain