Gene : Solyc04g077190.2 S. lycopersicum ITAG2.4
Defline:  (1 of 14) 3.2.1.8 - Endo-1,4-beta-xylanase Description:  Endo-1 4-beta-xylanase (AHRD V1 *-** B6SW51_MAIZE); contains Interpro domain(s) IPR013781 Glycoside hydrolase, subgroup, catalytic core
Genomic Order:  2166 Name:  ? Solyc04g077190.2
Secondary Identifier:  ? PAC:36141575
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g077190.2 0.5kb upstream 0.5kb upstream 7952 true SL2.50ch04: 62114450-62122401 Solanum lycopersicum
Solyc04g077190.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 62114450-62114949 Solanum lycopersicum
Solyc04g077190.2 0.5kb downstream 0.5kb downstream 7952 true SL2.50ch04: 62114950-62122901 Solanum lycopersicum
Solyc04g077190.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 62122402-62122901 Solanum lycopersicum
Solyc04g077190.2 1.0kb upstream 1.0kb upstream 8452 true SL2.50ch04: 62113950-62122401 Solanum lycopersicum
Solyc04g077190.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 62113950-62114949 Solanum lycopersicum
Solyc04g077190.2 1.0kb downstream 1.0kb downstream 8452 true SL2.50ch04: 62114950-62123401 Solanum lycopersicum
Solyc04g077190.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 62122402-62123401 Solanum lycopersicum
Solyc04g077190.2 2.0kb upstream 2.0kb upstream 9452 true SL2.50ch04: 62112950-62122401 Solanum lycopersicum
Solyc04g077190.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 62112950-62114949 Solanum lycopersicum
Solyc04g077190.2 2.0kb downstream 2.0kb downstream 9452 true SL2.50ch04: 62114950-62124401 Solanum lycopersicum
Solyc04g077190.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 62122402-62124401 Solanum lycopersicum
Solyc04g077190.2 5.0kb upstream 5.0kb upstream 12452 true SL2.50ch04: 62109950-62122401 Solanum lycopersicum
Solyc04g077190.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 62109950-62114949 Solanum lycopersicum
Solyc04g077190.2 5.0kb downstream 5.0kb downstream 12452 true SL2.50ch04: 62114950-62127401 Solanum lycopersicum
Solyc04g077190.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 62122402-62127401 Solanum lycopersicum
Solyc04g077190.2 10.0kb upstream 10.0kb upstream 17452 true SL2.50ch04: 62104950-62122401 Solanum lycopersicum
Solyc04g077190.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 62104950-62114949 Solanum lycopersicum
Solyc04g077190.2 10.0kb downstream 10.0kb downstream 17452 true SL2.50ch04: 62114950-62132401 Solanum lycopersicum
Solyc04g077190.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 62122402-62132401 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468017 5263 Asterids View MSA
123742236 5271 Pentapetalae View MSA
122786340 5272 Eudicot View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain