Gene : Solyc04g079320.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 4.2.1.75 - Uroporphyrinogen-III synthase / Uroporphyrinogen-III cosynthetase Description:  Uroporphyrinogen III synthase (AHRD V1 **** B0FMS4_HORVU); contains Interpro domain(s) IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
Genomic Order:  2378 Name:  ? Solyc04g079320.2
Secondary Identifier:  ? PAC:36141808
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5188 Solanum lycopersicum pathologic  
Slycopersicum PWY-5918 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g079320.2 0.5kb upstream 0.5kb upstream 15691 true SL2.50ch04: 63828097-63843787 Solanum lycopersicum
Solyc04g079320.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 63828097-63828596 Solanum lycopersicum
Solyc04g079320.2 0.5kb downstream 0.5kb downstream 15691 true SL2.50ch04: 63828597-63844287 Solanum lycopersicum
Solyc04g079320.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 63843788-63844287 Solanum lycopersicum
Solyc04g079320.2 1.0kb upstream 1.0kb upstream 16191 true SL2.50ch04: 63827597-63843787 Solanum lycopersicum
Solyc04g079320.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 63827597-63828596 Solanum lycopersicum
Solyc04g079320.2 1.0kb downstream 1.0kb downstream 16191 true SL2.50ch04: 63828597-63844787 Solanum lycopersicum
Solyc04g079320.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 63843788-63844787 Solanum lycopersicum
Solyc04g079320.2 2.0kb upstream 2.0kb upstream 17191 true SL2.50ch04: 63826597-63843787 Solanum lycopersicum
Solyc04g079320.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 63826597-63828596 Solanum lycopersicum
Solyc04g079320.2 2.0kb downstream 2.0kb downstream 17191 true SL2.50ch04: 63828597-63845787 Solanum lycopersicum
Solyc04g079320.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 63843788-63845787 Solanum lycopersicum
Solyc04g079320.2 5.0kb upstream 5.0kb upstream 20191 true SL2.50ch04: 63823597-63843787 Solanum lycopersicum
Solyc04g079320.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 63823597-63828596 Solanum lycopersicum
Solyc04g079320.2 5.0kb downstream 5.0kb downstream 20191 true SL2.50ch04: 63828597-63848787 Solanum lycopersicum
Solyc04g079320.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 63843788-63848787 Solanum lycopersicum
Solyc04g079320.2 10.0kb upstream 10.0kb upstream 25191 true SL2.50ch04: 63818597-63843787 Solanum lycopersicum
Solyc04g079320.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 63818597-63828596 Solanum lycopersicum
Solyc04g079320.2 10.0kb downstream 10.0kb downstream 25191 true SL2.50ch04: 63828597-63853787 Solanum lycopersicum
Solyc04g079320.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 63843788-63853787 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466918 5263 Asterids View MSA
123747400 5271 Pentapetalae View MSA
122796424 5272 Eudicot View MSA
122042127 5273 Angiosperm View MSA
121345873 5274 Embryophyte View MSA
123424653 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain