Gene : Solyc04g079310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Description:  RNA Binding Protein 47 (AHRD V1 **-* Q9LEB3_NICPL); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait
Genomic Order:  2377 Name:  ? Solyc04g079310.2
Secondary Identifier:  ? PAC:36143393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g079310.2 0.5kb upstream 0.5kb upstream 5741 true SL2.50ch04: 63818664-63824404 Solanum lycopersicum
Solyc04g079310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 63818664-63819163 Solanum lycopersicum
Solyc04g079310.2 0.5kb downstream 0.5kb downstream 5741 true SL2.50ch04: 63819164-63824904 Solanum lycopersicum
Solyc04g079310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 63824405-63824904 Solanum lycopersicum
Solyc04g079310.2 1.0kb upstream 1.0kb upstream 6241 true SL2.50ch04: 63818164-63824404 Solanum lycopersicum
Solyc04g079310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 63818164-63819163 Solanum lycopersicum
Solyc04g079310.2 1.0kb downstream 1.0kb downstream 6241 true SL2.50ch04: 63819164-63825404 Solanum lycopersicum
Solyc04g079310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 63824405-63825404 Solanum lycopersicum
Solyc04g079310.2 2.0kb upstream 2.0kb upstream 7241 true SL2.50ch04: 63817164-63824404 Solanum lycopersicum
Solyc04g079310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 63817164-63819163 Solanum lycopersicum
Solyc04g079310.2 2.0kb downstream 2.0kb downstream 7241 true SL2.50ch04: 63819164-63826404 Solanum lycopersicum
Solyc04g079310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 63824405-63826404 Solanum lycopersicum
Solyc04g079310.2 5.0kb upstream 5.0kb upstream 10241 true SL2.50ch04: 63814164-63824404 Solanum lycopersicum
Solyc04g079310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 63814164-63819163 Solanum lycopersicum
Solyc04g079310.2 5.0kb downstream 5.0kb downstream 10241 true SL2.50ch04: 63819164-63829404 Solanum lycopersicum
Solyc04g079310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 63824405-63829404 Solanum lycopersicum
Solyc04g079310.2 10.0kb upstream 10.0kb upstream 15241 true SL2.50ch04: 63809164-63824404 Solanum lycopersicum
Solyc04g079310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 63809164-63819163 Solanum lycopersicum
Solyc04g079310.2 10.0kb downstream 10.0kb downstream 15241 true SL2.50ch04: 63819164-63834404 Solanum lycopersicum
Solyc04g079310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 63824405-63834404 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470881 5263 Asterids View MSA
123751271 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain