Gene : Solyc12g099930.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Description:  Serine-glyoxylate aminotransferase (AHRD V1 ***- Q3S2I1_SPIPO); contains Interpro domain(s) IPR000192 Aminotransferase, class V/Cysteine desulfurase
Genomic Order:  2437 Name:  ? Solyc12g099930.1
Secondary Identifier:  ? PAC:36146657
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLYSYN-ALA-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g099930.1 0.5kb upstream 0.5kb upstream 3355 true SL2.50ch12: 66882901-66886255 Solanum lycopersicum
Solyc12g099930.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 66882901-66883400 Solanum lycopersicum
Solyc12g099930.1 0.5kb downstream 0.5kb downstream 3355 true SL2.50ch12: 66883401-66886755 Solanum lycopersicum
Solyc12g099930.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 66886256-66886755 Solanum lycopersicum
Solyc12g099930.1 1.0kb upstream 1.0kb upstream 3855 true SL2.50ch12: 66882401-66886255 Solanum lycopersicum
Solyc12g099930.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 66882401-66883400 Solanum lycopersicum
Solyc12g099930.1 1.0kb downstream 1.0kb downstream 3855 true SL2.50ch12: 66883401-66887255 Solanum lycopersicum
Solyc12g099930.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 66886256-66887255 Solanum lycopersicum
Solyc12g099930.1 2.0kb upstream 2.0kb upstream 4855 true SL2.50ch12: 66881401-66886255 Solanum lycopersicum
Solyc12g099930.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 66881401-66883400 Solanum lycopersicum
Solyc12g099930.1 2.0kb downstream 2.0kb downstream 4855 true SL2.50ch12: 66883401-66888255 Solanum lycopersicum
Solyc12g099930.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 66886256-66888255 Solanum lycopersicum
Solyc12g099930.1 5.0kb upstream 5.0kb upstream 7855 true SL2.50ch12: 66878401-66886255 Solanum lycopersicum
Solyc12g099930.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 66878401-66883400 Solanum lycopersicum
Solyc12g099930.1 5.0kb downstream 5.0kb downstream 7855 true SL2.50ch12: 66883401-66891255 Solanum lycopersicum
Solyc12g099930.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 66886256-66891255 Solanum lycopersicum
Solyc12g099930.1 10.0kb upstream 10.0kb upstream 12855 true SL2.50ch12: 66873401-66886255 Solanum lycopersicum
Solyc12g099930.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 66873401-66883400 Solanum lycopersicum
Solyc12g099930.1 10.0kb downstream 10.0kb downstream 12855 true SL2.50ch12: 66883401-66896255 Solanum lycopersicum
Solyc12g099930.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 66886256-66896255 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467191 5263 Asterids View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain