Gene : Solyc12g099800.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF00581//PF13616 - Rhodanese-like domain (Rhodanese) // PPIC-type PPIASE domain (Rotamase_3) Description:  Rhodanese-like domain containing protein (AHRD V1 *--- B1XHS0_SYNP2); contains Interpro domain(s) IPR001763 Rhodanese-like
Genomic Order:  2424 Name:  ? Solyc12g099800.1
Secondary Identifier:  ? PAC:36147815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g099800.1 0.5kb upstream 0.5kb upstream 4465 true SL2.50ch12: 66794082-66798546 Solanum lycopersicum
Solyc12g099800.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 66798047-66798546 Solanum lycopersicum
Solyc12g099800.1 0.5kb downstream 0.5kb downstream 4465 true SL2.50ch12: 66793582-66798046 Solanum lycopersicum
Solyc12g099800.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 66793582-66794081 Solanum lycopersicum
Solyc12g099800.1 1.0kb upstream 1.0kb upstream 4965 true SL2.50ch12: 66794082-66799046 Solanum lycopersicum
Solyc12g099800.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 66798047-66799046 Solanum lycopersicum
Solyc12g099800.1 1.0kb downstream 1.0kb downstream 4965 true SL2.50ch12: 66793082-66798046 Solanum lycopersicum
Solyc12g099800.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 66793082-66794081 Solanum lycopersicum
Solyc12g099800.1 2.0kb upstream 2.0kb upstream 5965 true SL2.50ch12: 66794082-66800046 Solanum lycopersicum
Solyc12g099800.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 66798047-66800046 Solanum lycopersicum
Solyc12g099800.1 2.0kb downstream 2.0kb downstream 5965 true SL2.50ch12: 66792082-66798046 Solanum lycopersicum
Solyc12g099800.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 66792082-66794081 Solanum lycopersicum
Solyc12g099800.1 5.0kb upstream 5.0kb upstream 8965 true SL2.50ch12: 66794082-66803046 Solanum lycopersicum
Solyc12g099800.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 66798047-66803046 Solanum lycopersicum
Solyc12g099800.1 5.0kb downstream 5.0kb downstream 8965 true SL2.50ch12: 66789082-66798046 Solanum lycopersicum
Solyc12g099800.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 66789082-66794081 Solanum lycopersicum
Solyc12g099800.1 10.0kb upstream 10.0kb upstream 13965 true SL2.50ch12: 66794082-66808046 Solanum lycopersicum
Solyc12g099800.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 66798047-66808046 Solanum lycopersicum
Solyc12g099800.1 10.0kb downstream 10.0kb downstream 13965 true SL2.50ch12: 66784082-66798046 Solanum lycopersicum
Solyc12g099800.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 66784082-66794081 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469668 5263 Asterids View MSA
123738142 5271 Pentapetalae View MSA
122789863 5272 Eudicot View MSA
122041568 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121344744 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain