Gene : Solyc12g099650.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Description:  Photosystem II 5 kDa protein, chloroplastic (AHRD V1 ***- PST2_GOSHI)
Genomic Order:  2409 Name:  ? Solyc12g099650.1
Secondary Identifier:  ? PAC:36148120
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g099650.1 0.5kb upstream 0.5kb upstream 842 true SL2.50ch12: 66709372-66710213 Solanum lycopersicum
Solyc12g099650.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 66709372-66709871 Solanum lycopersicum
Solyc12g099650.1 0.5kb downstream 0.5kb downstream 842 true SL2.50ch12: 66709872-66710713 Solanum lycopersicum
Solyc12g099650.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 66710214-66710713 Solanum lycopersicum
Solyc12g099650.1 1.0kb upstream 1.0kb upstream 1342 true SL2.50ch12: 66708872-66710213 Solanum lycopersicum
Solyc12g099650.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 66708872-66709871 Solanum lycopersicum
Solyc12g099650.1 1.0kb downstream 1.0kb downstream 1342 true SL2.50ch12: 66709872-66711213 Solanum lycopersicum
Solyc12g099650.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 66710214-66711213 Solanum lycopersicum
Solyc12g099650.1 2.0kb upstream 2.0kb upstream 2342 true SL2.50ch12: 66707872-66710213 Solanum lycopersicum
Solyc12g099650.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 66707872-66709871 Solanum lycopersicum
Solyc12g099650.1 2.0kb downstream 2.0kb downstream 2342 true SL2.50ch12: 66709872-66712213 Solanum lycopersicum
Solyc12g099650.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 66710214-66712213 Solanum lycopersicum
Solyc12g099650.1 5.0kb upstream 5.0kb upstream 5342 true SL2.50ch12: 66704872-66710213 Solanum lycopersicum
Solyc12g099650.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 66704872-66709871 Solanum lycopersicum
Solyc12g099650.1 5.0kb downstream 5.0kb downstream 5342 true SL2.50ch12: 66709872-66715213 Solanum lycopersicum
Solyc12g099650.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 66710214-66715213 Solanum lycopersicum
Solyc12g099650.1 10.0kb upstream 10.0kb upstream 10342 true SL2.50ch12: 66699872-66710213 Solanum lycopersicum
Solyc12g099650.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 66699872-66709871 Solanum lycopersicum
Solyc12g099650.1 10.0kb downstream 10.0kb downstream 10342 true SL2.50ch12: 66709872-66720213 Solanum lycopersicum
Solyc12g099650.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 66710214-66720213 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479042 5263 Asterids View MSA
123738637 5271 Pentapetalae View MSA
122793683 5272 Eudicot View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain