Gene : Solyc12g100360.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10183:SF267 - CALPAIN-5 Description:  Calpain-like protein (AHRD V1 ***- Q8RVL2_ARATH); contains Interpro domain(s) IPR001300 Peptidase C2, calpain
Genomic Order:  2480 Name:  ? Solyc12g100360.1
Secondary Identifier:  ? PAC:36148700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g100360.1 0.5kb upstream 0.5kb upstream 25538 true SL2.50ch12: 67116989-67142526 Solanum lycopersicum
Solyc12g100360.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 67116989-67117488 Solanum lycopersicum
Solyc12g100360.1 0.5kb downstream 0.5kb downstream 25538 true SL2.50ch12: 67117489-67143026 Solanum lycopersicum
Solyc12g100360.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 67142527-67143026 Solanum lycopersicum
Solyc12g100360.1 1.0kb upstream 1.0kb upstream 26038 true SL2.50ch12: 67116489-67142526 Solanum lycopersicum
Solyc12g100360.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 67116489-67117488 Solanum lycopersicum
Solyc12g100360.1 1.0kb downstream 1.0kb downstream 26038 true SL2.50ch12: 67117489-67143526 Solanum lycopersicum
Solyc12g100360.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 67142527-67143526 Solanum lycopersicum
Solyc12g100360.1 2.0kb upstream 2.0kb upstream 27038 true SL2.50ch12: 67115489-67142526 Solanum lycopersicum
Solyc12g100360.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 67115489-67117488 Solanum lycopersicum
Solyc12g100360.1 2.0kb downstream 2.0kb downstream 27038 true SL2.50ch12: 67117489-67144526 Solanum lycopersicum
Solyc12g100360.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 67142527-67144526 Solanum lycopersicum
Solyc12g100360.1 5.0kb upstream 5.0kb upstream 30038 true SL2.50ch12: 67112489-67142526 Solanum lycopersicum
Solyc12g100360.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 67112489-67117488 Solanum lycopersicum
Solyc12g100360.1 5.0kb downstream 5.0kb downstream 27715 true SL2.50ch12: 67117489-67145203 Solanum lycopersicum
Solyc12g100360.1 5.0kb downstream 5.0kb downstream 2677 false SL2.50ch12: 67142527-67145203 Solanum lycopersicum
Solyc12g100360.1 10.0kb upstream 10.0kb upstream 35038 true SL2.50ch12: 67107489-67142526 Solanum lycopersicum
Solyc12g100360.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 67107489-67117488 Solanum lycopersicum
Solyc12g100360.1 10.0kb downstream 10.0kb downstream 27715 true SL2.50ch12: 67117489-67145203 Solanum lycopersicum
Solyc12g100360.1 10.0kb downstream 10.0kb downstream 2677 false SL2.50ch12: 67142527-67145203 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472253 5263 Asterids View MSA
123739465 5271 Pentapetalae View MSA
122788693 5272 Eudicot View MSA
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain