Gene : Solyc12g099230.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31321:SF1 - PECTINESTERASE 67-RELATED Description:  Pectinesterase (AHRD V1 **** B9HIN1_POPTR); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic
Genomic Order:  2367 Name:  ? Solyc12g099230.1
Secondary Identifier:  ? PAC:36147047
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1081 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g099230.1 0.5kb upstream 0.5kb upstream 3729 true SL2.50ch12: 66440645-66444373 Solanum lycopersicum
Solyc12g099230.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 66440645-66441144 Solanum lycopersicum
Solyc12g099230.1 0.5kb downstream 0.5kb downstream 3729 true SL2.50ch12: 66441145-66444873 Solanum lycopersicum
Solyc12g099230.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 66444374-66444873 Solanum lycopersicum
Solyc12g099230.1 1.0kb upstream 1.0kb upstream 4229 true SL2.50ch12: 66440145-66444373 Solanum lycopersicum
Solyc12g099230.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 66440145-66441144 Solanum lycopersicum
Solyc12g099230.1 1.0kb downstream 1.0kb downstream 4229 true SL2.50ch12: 66441145-66445373 Solanum lycopersicum
Solyc12g099230.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 66444374-66445373 Solanum lycopersicum
Solyc12g099230.1 2.0kb upstream 2.0kb upstream 5229 true SL2.50ch12: 66439145-66444373 Solanum lycopersicum
Solyc12g099230.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 66439145-66441144 Solanum lycopersicum
Solyc12g099230.1 2.0kb downstream 2.0kb downstream 5229 true SL2.50ch12: 66441145-66446373 Solanum lycopersicum
Solyc12g099230.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 66444374-66446373 Solanum lycopersicum
Solyc12g099230.1 5.0kb upstream 5.0kb upstream 8229 true SL2.50ch12: 66436145-66444373 Solanum lycopersicum
Solyc12g099230.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 66436145-66441144 Solanum lycopersicum
Solyc12g099230.1 5.0kb downstream 5.0kb downstream 8229 true SL2.50ch12: 66441145-66449373 Solanum lycopersicum
Solyc12g099230.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 66444374-66449373 Solanum lycopersicum
Solyc12g099230.1 10.0kb upstream 10.0kb upstream 13229 true SL2.50ch12: 66431145-66444373 Solanum lycopersicum
Solyc12g099230.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 66431145-66441144 Solanum lycopersicum
Solyc12g099230.1 10.0kb downstream 10.0kb downstream 13229 true SL2.50ch12: 66441145-66454373 Solanum lycopersicum
Solyc12g099230.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 66444374-66454373 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466940 5263 Asterids View MSA
123736756 5271 Pentapetalae View MSA
122769877 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain