Gene : Solyc12g098920.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21262:SF12 - CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Description:  (P)ppGpp synthetase I (GTP pyrophosphokinase) SpoT/RelA (AHRD V1 *--- Q2RHV7_MOOTA); contains Interpro domain(s) IPR007685 RelA/SpoT
Genomic Order:  2336 Name:  ? Solyc12g098920.1
Secondary Identifier:  ? PAC:36147025
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g098920.1 0.5kb upstream 0.5kb upstream 3968 true SL2.50ch12: 66279301-66283268 Solanum lycopersicum
Solyc12g098920.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 66282769-66283268 Solanum lycopersicum
Solyc12g098920.1 0.5kb downstream 0.5kb downstream 3968 true SL2.50ch12: 66278801-66282768 Solanum lycopersicum
Solyc12g098920.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 66278801-66279300 Solanum lycopersicum
Solyc12g098920.1 1.0kb upstream 1.0kb upstream 4468 true SL2.50ch12: 66279301-66283768 Solanum lycopersicum
Solyc12g098920.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 66282769-66283768 Solanum lycopersicum
Solyc12g098920.1 1.0kb downstream 1.0kb downstream 4468 true SL2.50ch12: 66278301-66282768 Solanum lycopersicum
Solyc12g098920.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 66278301-66279300 Solanum lycopersicum
Solyc12g098920.1 2.0kb upstream 2.0kb upstream 5468 true SL2.50ch12: 66279301-66284768 Solanum lycopersicum
Solyc12g098920.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 66282769-66284768 Solanum lycopersicum
Solyc12g098920.1 2.0kb downstream 2.0kb downstream 5468 true SL2.50ch12: 66277301-66282768 Solanum lycopersicum
Solyc12g098920.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 66277301-66279300 Solanum lycopersicum
Solyc12g098920.1 5.0kb upstream 5.0kb upstream 8468 true SL2.50ch12: 66279301-66287768 Solanum lycopersicum
Solyc12g098920.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 66282769-66287768 Solanum lycopersicum
Solyc12g098920.1 5.0kb downstream 5.0kb downstream 8468 true SL2.50ch12: 66274301-66282768 Solanum lycopersicum
Solyc12g098920.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 66274301-66279300 Solanum lycopersicum
Solyc12g098920.1 10.0kb upstream 10.0kb upstream 13468 true SL2.50ch12: 66279301-66292768 Solanum lycopersicum
Solyc12g098920.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 66282769-66292768 Solanum lycopersicum
Solyc12g098920.1 10.0kb downstream 10.0kb downstream 13468 true SL2.50ch12: 66269301-66282768 Solanum lycopersicum
Solyc12g098920.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 66269301-66279300 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474136 5263 Asterids View MSA
123740387 5271 Pentapetalae View MSA
122793647 5272 Eudicot View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain