Gene : Solyc08g006160.2 S. lycopersicum ITAG2.4
Defline:  (1 of 14) PF04755 - PAP_fibrillin (PAP_fibrillin) Description:  Plastid fibrillin 3 (Fragment) (AHRD V1 **-- A6XBK9_COFCA); contains Interpro domain(s) IPR006843 PAP fibrillin
Genomic Order:  115 Name:  ? Solyc08g006160.2
Secondary Identifier:  ? PAC:36151435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g006160.2 0.5kb upstream 0.5kb upstream 3573 true SL2.50ch08: 880634-884206 Solanum lycopersicum
Solyc08g006160.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 883707-884206 Solanum lycopersicum
Solyc08g006160.2 0.5kb downstream 0.5kb downstream 3573 true SL2.50ch08: 880134-883706 Solanum lycopersicum
Solyc08g006160.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 880134-880633 Solanum lycopersicum
Solyc08g006160.2 1.0kb upstream 1.0kb upstream 4073 true SL2.50ch08: 880634-884706 Solanum lycopersicum
Solyc08g006160.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 883707-884706 Solanum lycopersicum
Solyc08g006160.2 1.0kb downstream 1.0kb downstream 4073 true SL2.50ch08: 879634-883706 Solanum lycopersicum
Solyc08g006160.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 879634-880633 Solanum lycopersicum
Solyc08g006160.2 2.0kb upstream 2.0kb upstream 5073 true SL2.50ch08: 880634-885706 Solanum lycopersicum
Solyc08g006160.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 883707-885706 Solanum lycopersicum
Solyc08g006160.2 2.0kb downstream 2.0kb downstream 5073 true SL2.50ch08: 878634-883706 Solanum lycopersicum
Solyc08g006160.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 878634-880633 Solanum lycopersicum
Solyc08g006160.2 5.0kb upstream 5.0kb upstream 8073 true SL2.50ch08: 880634-888706 Solanum lycopersicum
Solyc08g006160.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 883707-888706 Solanum lycopersicum
Solyc08g006160.2 5.0kb downstream 5.0kb downstream 8073 true SL2.50ch08: 875634-883706 Solanum lycopersicum
Solyc08g006160.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 875634-880633 Solanum lycopersicum
Solyc08g006160.2 10.0kb upstream 10.0kb upstream 13073 true SL2.50ch08: 880634-893706 Solanum lycopersicum
Solyc08g006160.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 883707-893706 Solanum lycopersicum
Solyc08g006160.2 10.0kb downstream 10.0kb downstream 13073 true SL2.50ch08: 870634-883706 Solanum lycopersicum
Solyc08g006160.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 870634-880633 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473014 5263 Asterids View MSA
123739839 5271 Pentapetalae View MSA
122789200 5272 Eudicot View MSA
122042948 5273 Angiosperm View MSA
121347076 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain