Gene : Solyc08g005940.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR14759 - STOP PROTEIN Description:  Trypsin proteinase inhibitor (AHRD V1 ***- Q1WL38_NICAC)
Genomic Order:  93 Name:  ? Solyc08g005940.1
Secondary Identifier:  ? PAC:36150364
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g005940.1 0.5kb upstream 0.5kb upstream 1880 true SL2.50ch08: 710054-711933 Solanum lycopersicum
Solyc08g005940.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 710054-710553 Solanum lycopersicum
Solyc08g005940.1 0.5kb downstream 0.5kb downstream 1880 true SL2.50ch08: 710554-712433 Solanum lycopersicum
Solyc08g005940.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 711934-712433 Solanum lycopersicum
Solyc08g005940.1 1.0kb upstream 1.0kb upstream 2380 true SL2.50ch08: 709554-711933 Solanum lycopersicum
Solyc08g005940.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 709554-710553 Solanum lycopersicum
Solyc08g005940.1 1.0kb downstream 1.0kb downstream 2380 true SL2.50ch08: 710554-712933 Solanum lycopersicum
Solyc08g005940.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 711934-712933 Solanum lycopersicum
Solyc08g005940.1 2.0kb upstream 2.0kb upstream 3380 true SL2.50ch08: 708554-711933 Solanum lycopersicum
Solyc08g005940.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 708554-710553 Solanum lycopersicum
Solyc08g005940.1 2.0kb downstream 2.0kb downstream 3380 true SL2.50ch08: 710554-713933 Solanum lycopersicum
Solyc08g005940.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 711934-713933 Solanum lycopersicum
Solyc08g005940.1 5.0kb upstream 5.0kb upstream 6380 true SL2.50ch08: 705554-711933 Solanum lycopersicum
Solyc08g005940.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 705554-710553 Solanum lycopersicum
Solyc08g005940.1 5.0kb downstream 5.0kb downstream 6380 true SL2.50ch08: 710554-716933 Solanum lycopersicum
Solyc08g005940.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 711934-716933 Solanum lycopersicum
Solyc08g005940.1 10.0kb upstream 10.0kb upstream 11380 true SL2.50ch08: 700554-711933 Solanum lycopersicum
Solyc08g005940.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 700554-710553 Solanum lycopersicum
Solyc08g005940.1 10.0kb downstream 10.0kb downstream 11380 true SL2.50ch08: 710554-721933 Solanum lycopersicum
Solyc08g005940.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 711934-721933 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121696332 5273 Angiosperm Singleton cluster - no MSA
121369541 5263 Asterids Singleton cluster - no MSA
123652568 5271 Pentapetalae Singleton cluster - no MSA
122686492 5272 Eudicot Singleton cluster - no MSA
120968138 5274 Embryophyte Singleton cluster - no MSA
123008427 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain