Gene : Solyc08g005540.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR11785//PTHR11785:SF355 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Description:  Amino acid permease-like protein (Fragment) (AHRD V1 *-*- B2ZME9_9ASTR); contains Interpro domain(s) IPR002293 Amino acid/polyamine transporter I
Genomic Order:  55 Name:  ? Solyc08g005540.1
Secondary Identifier:  ? PAC:36150672
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g005540.1 0.5kb upstream 0.5kb upstream 5471 true SL2.50ch08: 397461-402931 Solanum lycopersicum
Solyc08g005540.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 402432-402931 Solanum lycopersicum
Solyc08g005540.1 0.5kb downstream 0.5kb downstream 5471 true SL2.50ch08: 396961-402431 Solanum lycopersicum
Solyc08g005540.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 396961-397460 Solanum lycopersicum
Solyc08g005540.1 1.0kb upstream 1.0kb upstream 5971 true SL2.50ch08: 397461-403431 Solanum lycopersicum
Solyc08g005540.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 402432-403431 Solanum lycopersicum
Solyc08g005540.1 1.0kb downstream 1.0kb downstream 5971 true SL2.50ch08: 396461-402431 Solanum lycopersicum
Solyc08g005540.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 396461-397460 Solanum lycopersicum
Solyc08g005540.1 2.0kb upstream 2.0kb upstream 6971 true SL2.50ch08: 397461-404431 Solanum lycopersicum
Solyc08g005540.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 402432-404431 Solanum lycopersicum
Solyc08g005540.1 2.0kb downstream 2.0kb downstream 6971 true SL2.50ch08: 395461-402431 Solanum lycopersicum
Solyc08g005540.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 395461-397460 Solanum lycopersicum
Solyc08g005540.1 5.0kb upstream 5.0kb upstream 9971 true SL2.50ch08: 397461-407431 Solanum lycopersicum
Solyc08g005540.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 402432-407431 Solanum lycopersicum
Solyc08g005540.1 5.0kb downstream 5.0kb downstream 9971 true SL2.50ch08: 392461-402431 Solanum lycopersicum
Solyc08g005540.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 392461-397460 Solanum lycopersicum
Solyc08g005540.1 10.0kb upstream 10.0kb upstream 14971 true SL2.50ch08: 397461-412431 Solanum lycopersicum
Solyc08g005540.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 402432-412431 Solanum lycopersicum
Solyc08g005540.1 10.0kb downstream 10.0kb downstream 14971 true SL2.50ch08: 387461-402431 Solanum lycopersicum
Solyc08g005540.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 387461-397460 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481587 5263 Asterids View MSA
123742789 5271 Pentapetalae View MSA
122791655 5272 Eudicot View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain