Gene : Solyc12g088990.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF04129//PF15277 - Vps52 / Sac2 family (Vps52) // Exocyst complex component SEC3 N-terminal PIP2 binding PH (Sec3-PIP2_bind) Description:  Exocyst complex component 1 (AHRD V1 ***- Q5PPR2_MOUSE); contains Interpro domain(s) IPR019160 Exocyst complex, component Exoc1
Genomic Order:  2040 Name:  ? Solyc12g088990.1
Secondary Identifier:  ? PAC:36146770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g088990.1 0.5kb upstream 0.5kb upstream 16175 true SL2.50ch12: 64153121-64169295 Solanum lycopersicum
Solyc12g088990.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 64168796-64169295 Solanum lycopersicum
Solyc12g088990.1 0.5kb downstream 0.5kb downstream 16175 true SL2.50ch12: 64152621-64168795 Solanum lycopersicum
Solyc12g088990.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 64152621-64153120 Solanum lycopersicum
Solyc12g088990.1 1.0kb upstream 1.0kb upstream 16675 true SL2.50ch12: 64153121-64169795 Solanum lycopersicum
Solyc12g088990.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 64168796-64169795 Solanum lycopersicum
Solyc12g088990.1 1.0kb downstream 1.0kb downstream 16675 true SL2.50ch12: 64152121-64168795 Solanum lycopersicum
Solyc12g088990.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 64152121-64153120 Solanum lycopersicum
Solyc12g088990.1 2.0kb upstream 2.0kb upstream 17675 true SL2.50ch12: 64153121-64170795 Solanum lycopersicum
Solyc12g088990.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 64168796-64170795 Solanum lycopersicum
Solyc12g088990.1 2.0kb downstream 2.0kb downstream 17675 true SL2.50ch12: 64151121-64168795 Solanum lycopersicum
Solyc12g088990.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 64151121-64153120 Solanum lycopersicum
Solyc12g088990.1 5.0kb upstream 5.0kb upstream 20675 true SL2.50ch12: 64153121-64173795 Solanum lycopersicum
Solyc12g088990.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 64168796-64173795 Solanum lycopersicum
Solyc12g088990.1 5.0kb downstream 5.0kb downstream 20675 true SL2.50ch12: 64148121-64168795 Solanum lycopersicum
Solyc12g088990.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 64148121-64153120 Solanum lycopersicum
Solyc12g088990.1 10.0kb upstream 10.0kb upstream 25675 true SL2.50ch12: 64153121-64178795 Solanum lycopersicum
Solyc12g088990.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 64168796-64178795 Solanum lycopersicum
Solyc12g088990.1 10.0kb downstream 10.0kb downstream 25675 true SL2.50ch12: 64143121-64168795 Solanum lycopersicum
Solyc12g088990.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 64143121-64153120 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468285 5263 Asterids View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain