Gene : Solyc12g094640.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) 1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Description:  Glyceraldehyde-3-phosphate dehydrogenase B (AHRD V1 ***- B4F8L7_MAIZE); contains Interpro domain(s) IPR000173 Glyceraldehyde 3-phosphate dehydrogenase
Genomic Order:  2106 Name:  ? Solyc12g094640.1
Secondary Identifier:  ? PAC:36148343
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ANAEROFRUCAT-PWY Solanum lycopersicum pathologic  
Slycopersicum ANAGLYCOLYSIS-PWY Solanum lycopersicum pathologic  
Slycopersicum CALVIN-PWY Solanum lycopersicum pathologic  
Slycopersicum GLUCONEO-PWY Solanum lycopersicum pathologic  
Slycopersicum PHOTOALL-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-1042 Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum SUCSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g094640.1 0.5kb upstream 0.5kb upstream 3563 true SL2.50ch12: 64811431-64814993 Solanum lycopersicum
Solyc12g094640.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 64811431-64811930 Solanum lycopersicum
Solyc12g094640.1 0.5kb downstream 0.5kb downstream 3563 true SL2.50ch12: 64811931-64815493 Solanum lycopersicum
Solyc12g094640.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 64814994-64815493 Solanum lycopersicum
Solyc12g094640.1 1.0kb upstream 1.0kb upstream 4063 true SL2.50ch12: 64810931-64814993 Solanum lycopersicum
Solyc12g094640.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 64810931-64811930 Solanum lycopersicum
Solyc12g094640.1 1.0kb downstream 1.0kb downstream 4063 true SL2.50ch12: 64811931-64815993 Solanum lycopersicum
Solyc12g094640.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 64814994-64815993 Solanum lycopersicum
Solyc12g094640.1 2.0kb upstream 2.0kb upstream 5063 true SL2.50ch12: 64809931-64814993 Solanum lycopersicum
Solyc12g094640.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 64809931-64811930 Solanum lycopersicum
Solyc12g094640.1 2.0kb downstream 2.0kb downstream 5063 true SL2.50ch12: 64811931-64816993 Solanum lycopersicum
Solyc12g094640.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 64814994-64816993 Solanum lycopersicum
Solyc12g094640.1 5.0kb upstream 5.0kb upstream 8063 true SL2.50ch12: 64806931-64814993 Solanum lycopersicum
Solyc12g094640.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 64806931-64811930 Solanum lycopersicum
Solyc12g094640.1 5.0kb downstream 5.0kb downstream 8063 true SL2.50ch12: 64811931-64819993 Solanum lycopersicum
Solyc12g094640.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 64814994-64819993 Solanum lycopersicum
Solyc12g094640.1 10.0kb upstream 10.0kb upstream 13063 true SL2.50ch12: 64801931-64814993 Solanum lycopersicum
Solyc12g094640.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 64801931-64811930 Solanum lycopersicum
Solyc12g094640.1 10.0kb downstream 10.0kb downstream 13063 true SL2.50ch12: 64811931-64824993 Solanum lycopersicum
Solyc12g094640.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 64814994-64824993 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121389344 5263 Asterids View MSA
123746514 5271 Pentapetalae View MSA
122796484 5272 Eudicot View MSA
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain