Gene : Solyc12g094490.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 Description:  mRNA cleavage factor complex component Pcf11 (AHRD V1 *--- C5JVP7_AJEDS); contains Interpro domain(s) IPR008942 ENTH/VHS
Genomic Order:  2091 Name:  ? Solyc12g094490.1
Secondary Identifier:  ? PAC:36148261
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g094490.1 0.5kb upstream 0.5kb upstream 8296 true SL2.50ch12: 64702825-64711120 Solanum lycopersicum
Solyc12g094490.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 64702825-64703324 Solanum lycopersicum
Solyc12g094490.1 0.5kb downstream 0.5kb downstream 8296 true SL2.50ch12: 64703325-64711620 Solanum lycopersicum
Solyc12g094490.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 64711121-64711620 Solanum lycopersicum
Solyc12g094490.1 1.0kb upstream 1.0kb upstream 8796 true SL2.50ch12: 64702325-64711120 Solanum lycopersicum
Solyc12g094490.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 64702325-64703324 Solanum lycopersicum
Solyc12g094490.1 1.0kb downstream 1.0kb downstream 8796 true SL2.50ch12: 64703325-64712120 Solanum lycopersicum
Solyc12g094490.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 64711121-64712120 Solanum lycopersicum
Solyc12g094490.1 2.0kb upstream 2.0kb upstream 9796 true SL2.50ch12: 64701325-64711120 Solanum lycopersicum
Solyc12g094490.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 64701325-64703324 Solanum lycopersicum
Solyc12g094490.1 2.0kb downstream 2.0kb downstream 9796 true SL2.50ch12: 64703325-64713120 Solanum lycopersicum
Solyc12g094490.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 64711121-64713120 Solanum lycopersicum
Solyc12g094490.1 5.0kb upstream 5.0kb upstream 12796 true SL2.50ch12: 64698325-64711120 Solanum lycopersicum
Solyc12g094490.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 64698325-64703324 Solanum lycopersicum
Solyc12g094490.1 5.0kb downstream 5.0kb downstream 12796 true SL2.50ch12: 64703325-64716120 Solanum lycopersicum
Solyc12g094490.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 64711121-64716120 Solanum lycopersicum
Solyc12g094490.1 10.0kb upstream 10.0kb upstream 17796 true SL2.50ch12: 64693325-64711120 Solanum lycopersicum
Solyc12g094490.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 64693325-64703324 Solanum lycopersicum
Solyc12g094490.1 10.0kb downstream 10.0kb downstream 17796 true SL2.50ch12: 64703325-64721120 Solanum lycopersicum
Solyc12g094490.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 64711121-64721120 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478501 5263 Asterids View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain