Gene : Solyc12g089380.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31867:SF4 - EXPANSIN-A11 Description:  Expansin (AHRD V1 ***- Q9FVH0_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal
Genomic Order:  2079 Name:  ? Solyc12g089380.1
Secondary Identifier:  ? PAC:36148244
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g089380.1 0.5kb upstream 0.5kb upstream 2499 true SL2.50ch12: 64492348-64494846 Solanum lycopersicum
Solyc12g089380.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 64494347-64494846 Solanum lycopersicum
Solyc12g089380.1 0.5kb downstream 0.5kb downstream 2499 true SL2.50ch12: 64491848-64494346 Solanum lycopersicum
Solyc12g089380.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 64491848-64492347 Solanum lycopersicum
Solyc12g089380.1 1.0kb upstream 1.0kb upstream 2999 true SL2.50ch12: 64492348-64495346 Solanum lycopersicum
Solyc12g089380.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 64494347-64495346 Solanum lycopersicum
Solyc12g089380.1 1.0kb downstream 1.0kb downstream 2999 true SL2.50ch12: 64491348-64494346 Solanum lycopersicum
Solyc12g089380.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 64491348-64492347 Solanum lycopersicum
Solyc12g089380.1 2.0kb upstream 2.0kb upstream 3999 true SL2.50ch12: 64492348-64496346 Solanum lycopersicum
Solyc12g089380.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 64494347-64496346 Solanum lycopersicum
Solyc12g089380.1 2.0kb downstream 2.0kb downstream 3999 true SL2.50ch12: 64490348-64494346 Solanum lycopersicum
Solyc12g089380.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 64490348-64492347 Solanum lycopersicum
Solyc12g089380.1 5.0kb upstream 5.0kb upstream 6999 true SL2.50ch12: 64492348-64499346 Solanum lycopersicum
Solyc12g089380.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 64494347-64499346 Solanum lycopersicum
Solyc12g089380.1 5.0kb downstream 5.0kb downstream 6999 true SL2.50ch12: 64487348-64494346 Solanum lycopersicum
Solyc12g089380.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 64487348-64492347 Solanum lycopersicum
Solyc12g089380.1 10.0kb upstream 10.0kb upstream 11999 true SL2.50ch12: 64492348-64504346 Solanum lycopersicum
Solyc12g089380.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 64494347-64504346 Solanum lycopersicum
Solyc12g089380.1 10.0kb downstream 10.0kb downstream 11999 true SL2.50ch12: 64482348-64494346 Solanum lycopersicum
Solyc12g089380.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 64482348-64492347 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479108 5263 Asterids View MSA
123747449 5271 Pentapetalae View MSA
122792486 5272 Eudicot View MSA
122042176 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121348621 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain