Gene : Solyc12g088370.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Description:  Interferon-related developmental regulator family protein (AHRD V1 ***- B4FQN7_MAIZE); contains Interpro domain(s) IPR007701 Interferon-related developmental regulator, N-terminal
Genomic Order:  1978 Name:  ? Solyc12g088370.1
Secondary Identifier:  ? PAC:36148047
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g088370.1 0.5kb upstream 0.5kb upstream 5270 true SL2.50ch12: 63779746-63785015 Solanum lycopersicum
Solyc12g088370.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 63779746-63780245 Solanum lycopersicum
Solyc12g088370.1 0.5kb downstream 0.5kb downstream 5270 true SL2.50ch12: 63780246-63785515 Solanum lycopersicum
Solyc12g088370.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 63785016-63785515 Solanum lycopersicum
Solyc12g088370.1 1.0kb upstream 1.0kb upstream 5770 true SL2.50ch12: 63779246-63785015 Solanum lycopersicum
Solyc12g088370.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 63779246-63780245 Solanum lycopersicum
Solyc12g088370.1 1.0kb downstream 1.0kb downstream 5770 true SL2.50ch12: 63780246-63786015 Solanum lycopersicum
Solyc12g088370.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 63785016-63786015 Solanum lycopersicum
Solyc12g088370.1 2.0kb upstream 2.0kb upstream 6770 true SL2.50ch12: 63778246-63785015 Solanum lycopersicum
Solyc12g088370.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 63778246-63780245 Solanum lycopersicum
Solyc12g088370.1 2.0kb downstream 2.0kb downstream 6770 true SL2.50ch12: 63780246-63787015 Solanum lycopersicum
Solyc12g088370.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 63785016-63787015 Solanum lycopersicum
Solyc12g088370.1 5.0kb upstream 5.0kb upstream 9770 true SL2.50ch12: 63775246-63785015 Solanum lycopersicum
Solyc12g088370.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 63775246-63780245 Solanum lycopersicum
Solyc12g088370.1 5.0kb downstream 5.0kb downstream 9770 true SL2.50ch12: 63780246-63790015 Solanum lycopersicum
Solyc12g088370.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 63785016-63790015 Solanum lycopersicum
Solyc12g088370.1 10.0kb upstream 10.0kb upstream 14770 true SL2.50ch12: 63770246-63785015 Solanum lycopersicum
Solyc12g088370.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 63770246-63780245 Solanum lycopersicum
Solyc12g088370.1 10.0kb downstream 10.0kb downstream 14770 true SL2.50ch12: 63780246-63795015 Solanum lycopersicum
Solyc12g088370.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 63785016-63795015 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479340 5263 Asterids View MSA
123738030 5271 Pentapetalae View MSA
122785868 5272 Eudicot View MSA
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain