Gene : Solyc12g096390.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11717:SF2 - PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED Description:  Protein C2orf79 homolog (AHRD V1 *--- D3PGK2_9MAXI); contains Interpro domain(s) IPR017867 Protein-tyrosine phosphatase, low molecular weight
Genomic Order:  2182 Name:  ? Solyc12g096390.1
Secondary Identifier:  ? PAC:36147853
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g096390.1 0.5kb upstream 0.5kb upstream 2233 true SL2.50ch12: 65326498-65328730 Solanum lycopersicum
Solyc12g096390.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 65326498-65326997 Solanum lycopersicum
Solyc12g096390.1 0.5kb downstream 0.5kb downstream 2233 true SL2.50ch12: 65326998-65329230 Solanum lycopersicum
Solyc12g096390.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 65328731-65329230 Solanum lycopersicum
Solyc12g096390.1 1.0kb upstream 1.0kb upstream 2733 true SL2.50ch12: 65325998-65328730 Solanum lycopersicum
Solyc12g096390.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 65325998-65326997 Solanum lycopersicum
Solyc12g096390.1 1.0kb downstream 1.0kb downstream 2733 true SL2.50ch12: 65326998-65329730 Solanum lycopersicum
Solyc12g096390.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 65328731-65329730 Solanum lycopersicum
Solyc12g096390.1 2.0kb upstream 2.0kb upstream 3733 true SL2.50ch12: 65324998-65328730 Solanum lycopersicum
Solyc12g096390.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 65324998-65326997 Solanum lycopersicum
Solyc12g096390.1 2.0kb downstream 2.0kb downstream 3733 true SL2.50ch12: 65326998-65330730 Solanum lycopersicum
Solyc12g096390.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 65328731-65330730 Solanum lycopersicum
Solyc12g096390.1 5.0kb upstream 5.0kb upstream 6733 true SL2.50ch12: 65321998-65328730 Solanum lycopersicum
Solyc12g096390.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 65321998-65326997 Solanum lycopersicum
Solyc12g096390.1 5.0kb downstream 5.0kb downstream 6733 true SL2.50ch12: 65326998-65333730 Solanum lycopersicum
Solyc12g096390.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 65328731-65333730 Solanum lycopersicum
Solyc12g096390.1 10.0kb upstream 10.0kb upstream 11733 true SL2.50ch12: 65316998-65328730 Solanum lycopersicum
Solyc12g096390.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 65316998-65326997 Solanum lycopersicum
Solyc12g096390.1 10.0kb downstream 10.0kb downstream 11733 true SL2.50ch12: 65326998-65338730 Solanum lycopersicum
Solyc12g096390.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 65328731-65338730 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481675 5263 Asterids View MSA
123751866 5271 Pentapetalae View MSA
122787633 5272 Eudicot View MSA
122042660 5273 Angiosperm View MSA
121347081 5274 Embryophyte View MSA
123425673 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain