Gene : Solyc12g049230.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12758//PTHR12758:SF23 - APOPTOSIS INHIBITOR 5-RELATED // SUBFAMILY NOT NAMED Description:  Hydroxyproline-rich glycoprotein-like (AHRD V1 *--- Q69NN2_ORYSJ); contains Interpro domain(s) IPR009719 Protein of unknown function DUF1296
Genomic Order:  1173 Name:  ? Solyc12g049230.1
Secondary Identifier:  ? PAC:36148383
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g049230.1 0.5kb upstream 0.5kb upstream 11945 true SL2.50ch12: 37234585-37246529 Solanum lycopersicum
Solyc12g049230.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 37246030-37246529 Solanum lycopersicum
Solyc12g049230.1 0.5kb downstream 0.5kb downstream 11945 true SL2.50ch12: 37234085-37246029 Solanum lycopersicum
Solyc12g049230.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 37234085-37234584 Solanum lycopersicum
Solyc12g049230.1 1.0kb upstream 1.0kb upstream 12445 true SL2.50ch12: 37234585-37247029 Solanum lycopersicum
Solyc12g049230.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 37246030-37247029 Solanum lycopersicum
Solyc12g049230.1 1.0kb downstream 1.0kb downstream 12445 true SL2.50ch12: 37233585-37246029 Solanum lycopersicum
Solyc12g049230.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 37233585-37234584 Solanum lycopersicum
Solyc12g049230.1 2.0kb upstream 2.0kb upstream 13445 true SL2.50ch12: 37234585-37248029 Solanum lycopersicum
Solyc12g049230.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 37246030-37248029 Solanum lycopersicum
Solyc12g049230.1 2.0kb downstream 2.0kb downstream 13445 true SL2.50ch12: 37232585-37246029 Solanum lycopersicum
Solyc12g049230.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 37232585-37234584 Solanum lycopersicum
Solyc12g049230.1 5.0kb upstream 5.0kb upstream 16445 true SL2.50ch12: 37234585-37251029 Solanum lycopersicum
Solyc12g049230.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 37246030-37251029 Solanum lycopersicum
Solyc12g049230.1 5.0kb downstream 5.0kb downstream 16445 true SL2.50ch12: 37229585-37246029 Solanum lycopersicum
Solyc12g049230.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 37229585-37234584 Solanum lycopersicum
Solyc12g049230.1 10.0kb upstream 10.0kb upstream 21445 true SL2.50ch12: 37234585-37256029 Solanum lycopersicum
Solyc12g049230.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 37246030-37256029 Solanum lycopersicum
Solyc12g049230.1 10.0kb downstream 10.0kb downstream 21445 true SL2.50ch12: 37224585-37246029 Solanum lycopersicum
Solyc12g049230.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 37224585-37234584 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466909 5263 Asterids View MSA
123736740 5271 Pentapetalae View MSA
122792885 5272 Eudicot View MSA
122045000 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain