Gene : Solyc12g044270.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Description:  Pollen-specific kinase partner protein-like protein (Fragment) (AHRD V1 *--- Q5DK68_SOLLC); contains Interpro domain(s) IPR005512 Rop nucleotide exchanger, PRONE
Genomic Order:  1264 Name:  ? Solyc12g044270.1
Secondary Identifier:  ? PAC:36147774
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g044270.1 0.5kb upstream 0.5kb upstream 3015 true SL2.50ch12: 38717475-38720489 Solanum lycopersicum
Solyc12g044270.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 38719990-38720489 Solanum lycopersicum
Solyc12g044270.1 0.5kb downstream 0.5kb downstream 3015 true SL2.50ch12: 38716975-38719989 Solanum lycopersicum
Solyc12g044270.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 38716975-38717474 Solanum lycopersicum
Solyc12g044270.1 1.0kb upstream 1.0kb upstream 3515 true SL2.50ch12: 38717475-38720989 Solanum lycopersicum
Solyc12g044270.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 38719990-38720989 Solanum lycopersicum
Solyc12g044270.1 1.0kb downstream 1.0kb downstream 3515 true SL2.50ch12: 38716475-38719989 Solanum lycopersicum
Solyc12g044270.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 38716475-38717474 Solanum lycopersicum
Solyc12g044270.1 2.0kb upstream 2.0kb upstream 4515 true SL2.50ch12: 38717475-38721989 Solanum lycopersicum
Solyc12g044270.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 38719990-38721989 Solanum lycopersicum
Solyc12g044270.1 2.0kb downstream 2.0kb downstream 4515 true SL2.50ch12: 38715475-38719989 Solanum lycopersicum
Solyc12g044270.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 38715475-38717474 Solanum lycopersicum
Solyc12g044270.1 5.0kb upstream 5.0kb upstream 7515 true SL2.50ch12: 38717475-38724989 Solanum lycopersicum
Solyc12g044270.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 38719990-38724989 Solanum lycopersicum
Solyc12g044270.1 5.0kb downstream 5.0kb downstream 7515 true SL2.50ch12: 38712475-38719989 Solanum lycopersicum
Solyc12g044270.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 38712475-38717474 Solanum lycopersicum
Solyc12g044270.1 10.0kb upstream 10.0kb upstream 12515 true SL2.50ch12: 38717475-38729989 Solanum lycopersicum
Solyc12g044270.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 38719990-38729989 Solanum lycopersicum
Solyc12g044270.1 10.0kb downstream 10.0kb downstream 12515 true SL2.50ch12: 38707475-38719989 Solanum lycopersicum
Solyc12g044270.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 38707475-38717474 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478244 5263 Asterids View MSA
123751413 5271 Pentapetalae View MSA
122794787 5272 Eudicot View MSA
122041932 5273 Angiosperm View MSA
121309904 5274 Embryophyte View MSA
123347537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain