Gene : Solyc12g043160.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG4766 - Uncharacterized conserved protein Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR015157 Translation machinery associated TMA7
Genomic Order:  1276 Name:  ? Solyc12g043160.1
Secondary Identifier:  ? PAC:36147135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g043160.1 0.5kb upstream 0.5kb upstream 2163 true SL2.50ch12: 38979651-38981813 Solanum lycopersicum
Solyc12g043160.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 38981314-38981813 Solanum lycopersicum
Solyc12g043160.1 0.5kb downstream 0.5kb downstream 2163 true SL2.50ch12: 38979151-38981313 Solanum lycopersicum
Solyc12g043160.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 38979151-38979650 Solanum lycopersicum
Solyc12g043160.1 1.0kb upstream 1.0kb upstream 2663 true SL2.50ch12: 38979651-38982313 Solanum lycopersicum
Solyc12g043160.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 38981314-38982313 Solanum lycopersicum
Solyc12g043160.1 1.0kb downstream 1.0kb downstream 2663 true SL2.50ch12: 38978651-38981313 Solanum lycopersicum
Solyc12g043160.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 38978651-38979650 Solanum lycopersicum
Solyc12g043160.1 2.0kb upstream 2.0kb upstream 3663 true SL2.50ch12: 38979651-38983313 Solanum lycopersicum
Solyc12g043160.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 38981314-38983313 Solanum lycopersicum
Solyc12g043160.1 2.0kb downstream 2.0kb downstream 3663 true SL2.50ch12: 38977651-38981313 Solanum lycopersicum
Solyc12g043160.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 38977651-38979650 Solanum lycopersicum
Solyc12g043160.1 5.0kb upstream 5.0kb upstream 6663 true SL2.50ch12: 38979651-38986313 Solanum lycopersicum
Solyc12g043160.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 38981314-38986313 Solanum lycopersicum
Solyc12g043160.1 5.0kb downstream 5.0kb downstream 6663 true SL2.50ch12: 38974651-38981313 Solanum lycopersicum
Solyc12g043160.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 38974651-38979650 Solanum lycopersicum
Solyc12g043160.1 10.0kb upstream 10.0kb upstream 11663 true SL2.50ch12: 38979651-38991313 Solanum lycopersicum
Solyc12g043160.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 38981314-38991313 Solanum lycopersicum
Solyc12g043160.1 10.0kb downstream 10.0kb downstream 11663 true SL2.50ch12: 38969651-38981313 Solanum lycopersicum
Solyc12g043160.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 38969651-38979650 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466949 5263 Asterids View MSA
123736760 5271 Pentapetalae View MSA
122795345 5272 Eudicot View MSA
122043328 5273 Angiosperm View MSA
121346242 5274 Embryophyte View MSA
123427938 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain