Gene : Solyc12g062960.1 S. lycopersicum ITAG2.4
Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR000434 Polycystic kidney disease type 1 protein Genomic Order:  1119
Name:  ? Solyc12g062960.1 Secondary Identifier:  ? PAC:36148031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g062960.1 0.5kb upstream 0.5kb upstream 7055 true SL2.50ch12: 35988446-35995500 Solanum lycopersicum
Solyc12g062960.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 35988446-35988945 Solanum lycopersicum
Solyc12g062960.1 0.5kb downstream 0.5kb downstream 7055 true SL2.50ch12: 35988946-35996000 Solanum lycopersicum
Solyc12g062960.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 35995501-35996000 Solanum lycopersicum
Solyc12g062960.1 1.0kb upstream 1.0kb upstream 7555 true SL2.50ch12: 35987946-35995500 Solanum lycopersicum
Solyc12g062960.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 35987946-35988945 Solanum lycopersicum
Solyc12g062960.1 1.0kb downstream 1.0kb downstream 7555 true SL2.50ch12: 35988946-35996500 Solanum lycopersicum
Solyc12g062960.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 35995501-35996500 Solanum lycopersicum
Solyc12g062960.1 2.0kb upstream 2.0kb upstream 8555 true SL2.50ch12: 35986946-35995500 Solanum lycopersicum
Solyc12g062960.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 35986946-35988945 Solanum lycopersicum
Solyc12g062960.1 2.0kb downstream 2.0kb downstream 8555 true SL2.50ch12: 35988946-35997500 Solanum lycopersicum
Solyc12g062960.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 35995501-35997500 Solanum lycopersicum
Solyc12g062960.1 5.0kb upstream 5.0kb upstream 11555 true SL2.50ch12: 35983946-35995500 Solanum lycopersicum
Solyc12g062960.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 35983946-35988945 Solanum lycopersicum
Solyc12g062960.1 5.0kb downstream 5.0kb downstream 11555 true SL2.50ch12: 35988946-36000500 Solanum lycopersicum
Solyc12g062960.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 35995501-36000500 Solanum lycopersicum
Solyc12g062960.1 10.0kb upstream 10.0kb upstream 16555 true SL2.50ch12: 35978946-35995500 Solanum lycopersicum
Solyc12g062960.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 35978946-35988945 Solanum lycopersicum
Solyc12g062960.1 10.0kb downstream 10.0kb downstream 16555 true SL2.50ch12: 35988946-36005500 Solanum lycopersicum
Solyc12g062960.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 35995501-36005500 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121698302 5273 Angiosperm Singleton cluster - no MSA
121372101 5263 Asterids Singleton cluster - no MSA
123654625 5271 Pentapetalae Singleton cluster - no MSA
122688545 5272 Eudicot Singleton cluster - no MSA
120970089 5274 Embryophyte Singleton cluster - no MSA
123010368 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain