Gene : Solyc12g056350.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR013097 Stress responsive alpha-beta barrel
Genomic Order:  1838 Name:  ? Solyc12g056350.1
Secondary Identifier:  ? PAC:36147965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g056350.1 0.5kb upstream 0.5kb upstream 4291 true SL2.50ch12: 62306695-62310985 Solanum lycopersicum
Solyc12g056350.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 62310486-62310985 Solanum lycopersicum
Solyc12g056350.1 0.5kb downstream 0.5kb downstream 4291 true SL2.50ch12: 62306195-62310485 Solanum lycopersicum
Solyc12g056350.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 62306195-62306694 Solanum lycopersicum
Solyc12g056350.1 1.0kb upstream 1.0kb upstream 4791 true SL2.50ch12: 62306695-62311485 Solanum lycopersicum
Solyc12g056350.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 62310486-62311485 Solanum lycopersicum
Solyc12g056350.1 1.0kb downstream 1.0kb downstream 4791 true SL2.50ch12: 62305695-62310485 Solanum lycopersicum
Solyc12g056350.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 62305695-62306694 Solanum lycopersicum
Solyc12g056350.1 2.0kb upstream 2.0kb upstream 5791 true SL2.50ch12: 62306695-62312485 Solanum lycopersicum
Solyc12g056350.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 62310486-62312485 Solanum lycopersicum
Solyc12g056350.1 2.0kb downstream 2.0kb downstream 5791 true SL2.50ch12: 62304695-62310485 Solanum lycopersicum
Solyc12g056350.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 62304695-62306694 Solanum lycopersicum
Solyc12g056350.1 5.0kb upstream 5.0kb upstream 8791 true SL2.50ch12: 62306695-62315485 Solanum lycopersicum
Solyc12g056350.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 62310486-62315485 Solanum lycopersicum
Solyc12g056350.1 5.0kb downstream 5.0kb downstream 8791 true SL2.50ch12: 62301695-62310485 Solanum lycopersicum
Solyc12g056350.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 62301695-62306694 Solanum lycopersicum
Solyc12g056350.1 10.0kb upstream 10.0kb upstream 13791 true SL2.50ch12: 62306695-62320485 Solanum lycopersicum
Solyc12g056350.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 62310486-62320485 Solanum lycopersicum
Solyc12g056350.1 10.0kb downstream 10.0kb downstream 13791 true SL2.50ch12: 62296695-62310485 Solanum lycopersicum
Solyc12g056350.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 62296695-62306694 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473887 5263 Asterids View MSA
123740264 5271 Pentapetalae View MSA
122787104 5272 Eudicot View MSA
122046147 5273 Angiosperm View MSA
121347118 5274 Embryophyte View MSA
123426547 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain