Gene : Solyc12g056250.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Description:  Glutathione S-transferase (AHRD V1 ***- Q9M558_EUPES); contains Interpro domain(s) IPR017933 Glutathione S-transferase/chloride channel, C-terminal
Genomic Order:  1828 Name:  ? Solyc12g056250.1
Secondary Identifier:  ? PAC:36147234
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6842 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g056250.1 0.5kb upstream 0.5kb upstream 2638 true SL2.50ch12: 62208102-62210739 Solanum lycopersicum
Solyc12g056250.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 62210240-62210739 Solanum lycopersicum
Solyc12g056250.1 0.5kb downstream 0.5kb downstream 2638 true SL2.50ch12: 62207602-62210239 Solanum lycopersicum
Solyc12g056250.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 62207602-62208101 Solanum lycopersicum
Solyc12g056250.1 1.0kb upstream 1.0kb upstream 3138 true SL2.50ch12: 62208102-62211239 Solanum lycopersicum
Solyc12g056250.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 62210240-62211239 Solanum lycopersicum
Solyc12g056250.1 1.0kb downstream 1.0kb downstream 3138 true SL2.50ch12: 62207102-62210239 Solanum lycopersicum
Solyc12g056250.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 62207102-62208101 Solanum lycopersicum
Solyc12g056250.1 2.0kb upstream 2.0kb upstream 4138 true SL2.50ch12: 62208102-62212239 Solanum lycopersicum
Solyc12g056250.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 62210240-62212239 Solanum lycopersicum
Solyc12g056250.1 2.0kb downstream 2.0kb downstream 4138 true SL2.50ch12: 62206102-62210239 Solanum lycopersicum
Solyc12g056250.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 62206102-62208101 Solanum lycopersicum
Solyc12g056250.1 5.0kb upstream 5.0kb upstream 7138 true SL2.50ch12: 62208102-62215239 Solanum lycopersicum
Solyc12g056250.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 62210240-62215239 Solanum lycopersicum
Solyc12g056250.1 5.0kb downstream 5.0kb downstream 7138 true SL2.50ch12: 62203102-62210239 Solanum lycopersicum
Solyc12g056250.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 62203102-62208101 Solanum lycopersicum
Solyc12g056250.1 10.0kb upstream 10.0kb upstream 12138 true SL2.50ch12: 62208102-62220239 Solanum lycopersicum
Solyc12g056250.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 62210240-62220239 Solanum lycopersicum
Solyc12g056250.1 10.0kb downstream 10.0kb downstream 12138 true SL2.50ch12: 62198102-62210239 Solanum lycopersicum
Solyc12g056250.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 62198102-62208101 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
121413849 5263 Asterids View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain