Gene : Solyc12g056580.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Description:  Cellulose synthase (AHRD V1 ***- B9GTH4_POPTR); contains Interpro domain(s) IPR005150 Cellulose synthase
Genomic Order:  1861 Name:  ? Solyc12g056580.1
Secondary Identifier:  ? PAC:36147923
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1001 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g056580.1 0.5kb upstream 0.5kb upstream 7005 true SL2.50ch12: 62523543-62530547 Solanum lycopersicum
Solyc12g056580.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 62523543-62524042 Solanum lycopersicum
Solyc12g056580.1 0.5kb downstream 0.5kb downstream 7005 true SL2.50ch12: 62524043-62531047 Solanum lycopersicum
Solyc12g056580.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 62530548-62531047 Solanum lycopersicum
Solyc12g056580.1 1.0kb upstream 1.0kb upstream 7505 true SL2.50ch12: 62523043-62530547 Solanum lycopersicum
Solyc12g056580.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 62523043-62524042 Solanum lycopersicum
Solyc12g056580.1 1.0kb downstream 1.0kb downstream 7505 true SL2.50ch12: 62524043-62531547 Solanum lycopersicum
Solyc12g056580.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 62530548-62531547 Solanum lycopersicum
Solyc12g056580.1 2.0kb upstream 2.0kb upstream 8505 true SL2.50ch12: 62522043-62530547 Solanum lycopersicum
Solyc12g056580.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 62522043-62524042 Solanum lycopersicum
Solyc12g056580.1 2.0kb downstream 2.0kb downstream 8505 true SL2.50ch12: 62524043-62532547 Solanum lycopersicum
Solyc12g056580.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 62530548-62532547 Solanum lycopersicum
Solyc12g056580.1 5.0kb upstream 5.0kb upstream 11505 true SL2.50ch12: 62519043-62530547 Solanum lycopersicum
Solyc12g056580.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 62519043-62524042 Solanum lycopersicum
Solyc12g056580.1 5.0kb downstream 5.0kb downstream 11505 true SL2.50ch12: 62524043-62535547 Solanum lycopersicum
Solyc12g056580.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 62530548-62535547 Solanum lycopersicum
Solyc12g056580.1 10.0kb upstream 10.0kb upstream 16505 true SL2.50ch12: 62514043-62530547 Solanum lycopersicum
Solyc12g056580.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 62514043-62524042 Solanum lycopersicum
Solyc12g056580.1 10.0kb downstream 10.0kb downstream 16505 true SL2.50ch12: 62524043-62540547 Solanum lycopersicum
Solyc12g056580.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 62530548-62540547 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474349 5263 Asterids View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain