Gene : Solyc12g035650.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14308 - nuclear pore complex protein Nup54 (NUP54, NUP57) Description:  Nucleoporin p54 (AHRD V1 *-*- B5X399_SALSA)
Genomic Order:  1707 Name:  ? Solyc12g035650.1
Secondary Identifier:  ? PAC:36148577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g035650.1 0.5kb upstream 0.5kb upstream 14220 true SL2.50ch12: 54980118-54994337 Solanum lycopersicum
Solyc12g035650.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 54980118-54980617 Solanum lycopersicum
Solyc12g035650.1 0.5kb downstream 0.5kb downstream 14220 true SL2.50ch12: 54980618-54994837 Solanum lycopersicum
Solyc12g035650.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 54994338-54994837 Solanum lycopersicum
Solyc12g035650.1 1.0kb upstream 1.0kb upstream 14720 true SL2.50ch12: 54979618-54994337 Solanum lycopersicum
Solyc12g035650.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 54979618-54980617 Solanum lycopersicum
Solyc12g035650.1 1.0kb downstream 1.0kb downstream 14720 true SL2.50ch12: 54980618-54995337 Solanum lycopersicum
Solyc12g035650.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 54994338-54995337 Solanum lycopersicum
Solyc12g035650.1 2.0kb upstream 2.0kb upstream 15720 true SL2.50ch12: 54978618-54994337 Solanum lycopersicum
Solyc12g035650.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 54978618-54980617 Solanum lycopersicum
Solyc12g035650.1 2.0kb downstream 2.0kb downstream 15720 true SL2.50ch12: 54980618-54996337 Solanum lycopersicum
Solyc12g035650.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 54994338-54996337 Solanum lycopersicum
Solyc12g035650.1 5.0kb upstream 5.0kb upstream 18720 true SL2.50ch12: 54975618-54994337 Solanum lycopersicum
Solyc12g035650.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 54975618-54980617 Solanum lycopersicum
Solyc12g035650.1 5.0kb downstream 5.0kb downstream 18720 true SL2.50ch12: 54980618-54999337 Solanum lycopersicum
Solyc12g035650.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 54994338-54999337 Solanum lycopersicum
Solyc12g035650.1 10.0kb upstream 10.0kb upstream 23720 true SL2.50ch12: 54970618-54994337 Solanum lycopersicum
Solyc12g035650.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 54970618-54980617 Solanum lycopersicum
Solyc12g035650.1 10.0kb downstream 10.0kb downstream 23720 true SL2.50ch12: 54980618-55004337 Solanum lycopersicum
Solyc12g035650.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 54994338-55004337 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474980 5263 Asterids View MSA
123740833 5271 Pentapetalae View MSA
122795867 5272 Eudicot View MSA
122045094 5273 Angiosperm View MSA
121347023 5274 Embryophyte View MSA
123424455 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain