Gene : Solyc12g033060.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K02690 - photosystem I P700 chlorophyll a apoprotein A2 (psaB) Description:  Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V1 ***- A7Y3D1_IPOPU); contains Interpro domain(s) IPR001280 Photosystem I psaA and psaB
Genomic Order:  1756 Name:  ? Solyc12g033060.1
Secondary Identifier:  ? PAC:36147444
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PHOTOALL-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-101 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g033060.1 0.5kb upstream 0.5kb upstream 1416 true SL2.50ch12: 60948729-60950144 Solanum lycopersicum
Solyc12g033060.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 60949645-60950144 Solanum lycopersicum
Solyc12g033060.1 0.5kb downstream 0.5kb downstream 1416 true SL2.50ch12: 60948229-60949644 Solanum lycopersicum
Solyc12g033060.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 60948229-60948728 Solanum lycopersicum
Solyc12g033060.1 1.0kb upstream 1.0kb upstream 1916 true SL2.50ch12: 60948729-60950644 Solanum lycopersicum
Solyc12g033060.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 60949645-60950644 Solanum lycopersicum
Solyc12g033060.1 1.0kb downstream 1.0kb downstream 1916 true SL2.50ch12: 60947729-60949644 Solanum lycopersicum
Solyc12g033060.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 60947729-60948728 Solanum lycopersicum
Solyc12g033060.1 2.0kb upstream 2.0kb upstream 2916 true SL2.50ch12: 60948729-60951644 Solanum lycopersicum
Solyc12g033060.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 60949645-60951644 Solanum lycopersicum
Solyc12g033060.1 2.0kb downstream 2.0kb downstream 2916 true SL2.50ch12: 60946729-60949644 Solanum lycopersicum
Solyc12g033060.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 60946729-60948728 Solanum lycopersicum
Solyc12g033060.1 5.0kb upstream 5.0kb upstream 5916 true SL2.50ch12: 60948729-60954644 Solanum lycopersicum
Solyc12g033060.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 60949645-60954644 Solanum lycopersicum
Solyc12g033060.1 5.0kb downstream 5.0kb downstream 5916 true SL2.50ch12: 60943729-60949644 Solanum lycopersicum
Solyc12g033060.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 60943729-60948728 Solanum lycopersicum
Solyc12g033060.1 10.0kb upstream 10.0kb upstream 10916 true SL2.50ch12: 60948729-60959644 Solanum lycopersicum
Solyc12g033060.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 60949645-60959644 Solanum lycopersicum
Solyc12g033060.1 10.0kb downstream 10.0kb downstream 10916 true SL2.50ch12: 60938729-60949644 Solanum lycopersicum
Solyc12g033060.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 60938729-60948728 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029302 5273 Angiosperm View MSA
121479129 5263 Asterids View MSA
123753251 5271 Pentapetalae View MSA
122775013 5272 Eudicot View MSA
121350541 5274 Embryophyte View MSA
123381782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain