Gene : Solyc12g027890.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR22950:SF235 - LYSINE HISTIDINE TRANSPORTER 1-RELATED Description:  Lysine/histidine transporter (AHRD V1 ***- B9HTB5_POPTR); contains Interpro domain(s) IPR013057 Amino acid transporter, transmembrane
Genomic Order:  1023 Name:  ? Solyc12g027890.1
Secondary Identifier:  ? PAC:36148939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g027890.1 0.5kb upstream 0.5kb upstream 1220 true SL2.50ch12: 27934068-27935287 Solanum lycopersicum
Solyc12g027890.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 27934788-27935287 Solanum lycopersicum
Solyc12g027890.1 0.5kb downstream 0.5kb downstream 1220 true SL2.50ch12: 27933568-27934787 Solanum lycopersicum
Solyc12g027890.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 27933568-27934067 Solanum lycopersicum
Solyc12g027890.1 1.0kb upstream 1.0kb upstream 1720 true SL2.50ch12: 27934068-27935787 Solanum lycopersicum
Solyc12g027890.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 27934788-27935787 Solanum lycopersicum
Solyc12g027890.1 1.0kb downstream 1.0kb downstream 1720 true SL2.50ch12: 27933068-27934787 Solanum lycopersicum
Solyc12g027890.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 27933068-27934067 Solanum lycopersicum
Solyc12g027890.1 2.0kb upstream 2.0kb upstream 2720 true SL2.50ch12: 27934068-27936787 Solanum lycopersicum
Solyc12g027890.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 27934788-27936787 Solanum lycopersicum
Solyc12g027890.1 2.0kb downstream 2.0kb downstream 2720 true SL2.50ch12: 27932068-27934787 Solanum lycopersicum
Solyc12g027890.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 27932068-27934067 Solanum lycopersicum
Solyc12g027890.1 5.0kb upstream 5.0kb upstream 5720 true SL2.50ch12: 27934068-27939787 Solanum lycopersicum
Solyc12g027890.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 27934788-27939787 Solanum lycopersicum
Solyc12g027890.1 5.0kb downstream 5.0kb downstream 5720 true SL2.50ch12: 27929068-27934787 Solanum lycopersicum
Solyc12g027890.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 27929068-27934067 Solanum lycopersicum
Solyc12g027890.1 10.0kb upstream 10.0kb upstream 10720 true SL2.50ch12: 27934068-27944787 Solanum lycopersicum
Solyc12g027890.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 27934788-27944787 Solanum lycopersicum
Solyc12g027890.1 10.0kb downstream 10.0kb downstream 10720 true SL2.50ch12: 27924068-27934787 Solanum lycopersicum
Solyc12g027890.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 27924068-27934067 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121372354 5263 Asterids Singleton cluster - no MSA
123745911 5271 Pentapetalae View MSA
122771696 5272 Eudicot View MSA
122050905 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain