Gene : Solyc12g042080.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Description:  40S ribosomal protein S11 (AHRD V1 ***- Q1H8R1_CHERU); contains Interpro domain(s) IPR000266 Ribosomal protein S17
Genomic Order:  1378 Name:  ? Solyc12g042080.1
Secondary Identifier:  ? PAC:36147926
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g042080.1 0.5kb upstream 0.5kb upstream 2898 true SL2.50ch12: 40755594-40758491 Solanum lycopersicum
Solyc12g042080.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 40755594-40756093 Solanum lycopersicum
Solyc12g042080.1 0.5kb downstream 0.5kb downstream 2898 true SL2.50ch12: 40756094-40758991 Solanum lycopersicum
Solyc12g042080.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 40758492-40758991 Solanum lycopersicum
Solyc12g042080.1 1.0kb upstream 1.0kb upstream 3398 true SL2.50ch12: 40755094-40758491 Solanum lycopersicum
Solyc12g042080.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 40755094-40756093 Solanum lycopersicum
Solyc12g042080.1 1.0kb downstream 1.0kb downstream 3398 true SL2.50ch12: 40756094-40759491 Solanum lycopersicum
Solyc12g042080.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 40758492-40759491 Solanum lycopersicum
Solyc12g042080.1 2.0kb upstream 2.0kb upstream 4398 true SL2.50ch12: 40754094-40758491 Solanum lycopersicum
Solyc12g042080.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 40754094-40756093 Solanum lycopersicum
Solyc12g042080.1 2.0kb downstream 2.0kb downstream 4398 true SL2.50ch12: 40756094-40760491 Solanum lycopersicum
Solyc12g042080.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 40758492-40760491 Solanum lycopersicum
Solyc12g042080.1 5.0kb upstream 5.0kb upstream 7398 true SL2.50ch12: 40751094-40758491 Solanum lycopersicum
Solyc12g042080.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 40751094-40756093 Solanum lycopersicum
Solyc12g042080.1 5.0kb downstream 5.0kb downstream 7398 true SL2.50ch12: 40756094-40763491 Solanum lycopersicum
Solyc12g042080.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 40758492-40763491 Solanum lycopersicum
Solyc12g042080.1 10.0kb upstream 10.0kb upstream 12398 true SL2.50ch12: 40746094-40758491 Solanum lycopersicum
Solyc12g042080.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 40746094-40756093 Solanum lycopersicum
Solyc12g042080.1 10.0kb downstream 10.0kb downstream 12398 true SL2.50ch12: 40756094-40768491 Solanum lycopersicum
Solyc12g042080.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 40758492-40768491 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480031 5263 Asterids View MSA
123740255 5271 Pentapetalae View MSA
122794687 5272 Eudicot View MSA
122044220 5273 Angiosperm View MSA
121344694 5274 Embryophyte View MSA
123428242 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain