Gene : Solyc12g042740.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K03106 - signal recognition particle subunit SRP54 (SRP54, ffh) Description:  Signal recognition particle protein 3 (AHRD V1 ***- D7KD74_ARALY); contains Interpro domain(s) IPR000897 Signal recognition particle, SRP54 subunit, GTPase IPR006325 Signal recognition particle, SRP54 subunit
Genomic Order:  1316 Name:  ? Solyc12g042740.1
Secondary Identifier:  ? PAC:36147526
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g042740.1 0.5kb upstream 0.5kb upstream 6175 true SL2.50ch12: 39705833-39712007 Solanum lycopersicum
Solyc12g042740.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 39705833-39706332 Solanum lycopersicum
Solyc12g042740.1 0.5kb downstream 0.5kb downstream 6175 true SL2.50ch12: 39706333-39712507 Solanum lycopersicum
Solyc12g042740.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 39712008-39712507 Solanum lycopersicum
Solyc12g042740.1 1.0kb upstream 1.0kb upstream 6675 true SL2.50ch12: 39705333-39712007 Solanum lycopersicum
Solyc12g042740.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 39705333-39706332 Solanum lycopersicum
Solyc12g042740.1 1.0kb downstream 1.0kb downstream 6675 true SL2.50ch12: 39706333-39713007 Solanum lycopersicum
Solyc12g042740.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 39712008-39713007 Solanum lycopersicum
Solyc12g042740.1 2.0kb upstream 2.0kb upstream 7675 true SL2.50ch12: 39704333-39712007 Solanum lycopersicum
Solyc12g042740.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 39704333-39706332 Solanum lycopersicum
Solyc12g042740.1 2.0kb downstream 2.0kb downstream 7675 true SL2.50ch12: 39706333-39714007 Solanum lycopersicum
Solyc12g042740.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 39712008-39714007 Solanum lycopersicum
Solyc12g042740.1 5.0kb upstream 5.0kb upstream 10675 true SL2.50ch12: 39701333-39712007 Solanum lycopersicum
Solyc12g042740.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 39701333-39706332 Solanum lycopersicum
Solyc12g042740.1 5.0kb downstream 5.0kb downstream 10675 true SL2.50ch12: 39706333-39717007 Solanum lycopersicum
Solyc12g042740.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 39712008-39717007 Solanum lycopersicum
Solyc12g042740.1 10.0kb upstream 10.0kb upstream 15675 true SL2.50ch12: 39696333-39712007 Solanum lycopersicum
Solyc12g042740.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 39696333-39706332 Solanum lycopersicum
Solyc12g042740.1 10.0kb downstream 10.0kb downstream 15675 true SL2.50ch12: 39706333-39722007 Solanum lycopersicum
Solyc12g042740.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 39712008-39722007 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472864 5263 Asterids View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain